RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
SCRIB-208ENST00000546337 TEX2Q8IWB9 1127 aa18.24■□□□□ 0.51
SCRIB-208ENST00000546337 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
SCRIB-208ENST00000546337 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
SCRIB-208ENST00000546337 RNF208Q9H0X6 261 aa18.24■□□□□ 0.51
SCRIB-208ENST00000546337 ALDH8A1Q9H2A2 487 aaPredicted RBP18.24■□□□□ 0.51
SCRIB-208ENST00000546337 A1CFQ9NQ94 594 aaKnown RBP18.24■□□□□ 0.51
SCRIB-208ENST00000546337 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
SCRIB-208ENST00000546337 SYNGAP1Q96PV0 1343 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 PLXNB2O15031 1838 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 KIAA0100Q14667 2235 aaKnown RBP18.23■□□□□ 0.51
SCRIB-208ENST00000546337 ZBTB43O43298 467 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 GJA8P48165 433 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 GHRHRQ02643 423 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 CACNB2Q08289 660 aaPredicted RBP18.23■□□□□ 0.51
SCRIB-208ENST00000546337 QRICH1Q2TAL8 776 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 TINF2Q9BSI4 451 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 CYP39A1Q9NYL5 469 aa18.23■□□□□ 0.51
SCRIB-208ENST00000546337 ADD3Q9UEY8 706 aaKnown RBP18.23■□□□□ 0.51
SCRIB-208ENST00000546337 COL11A1P12107 1806 aaPredicted RBP18.23■□□□□ 0.51
SCRIB-208ENST00000546337 ASB14A6NK59 587 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 B4DLN1 442 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 SGPL1O95470 568 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 PRKAR2AP13861 404 aaKnown RBP18.22■□□□□ 0.51
SCRIB-208ENST00000546337 MRPL12P52815 198 aaKnown RBP18.22■□□□□ 0.51
SCRIB-208ENST00000546337 SNAP25P60880 206 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 COL9A3Q14050 684 aaPredicted RBP18.22■□□□□ 0.51
SCRIB-208ENST00000546337 MTFR1Q15390 333 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 CCL14Q16627 93 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 Q6ZUG5 572 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 CLEC4DQ8WXI8 215 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.22■□□□□ 0.515e-6■■□□□ 12.4
SCRIB-208ENST00000546337 HOMER2Q9NSB8 354 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 FLRT1Q9NZU1 646 aa18.22■□□□□ 0.51
SCRIB-208ENST00000546337 CYTH3O43739 400 aa18.21■□□□□ 0.51
SCRIB-208ENST00000546337 PGK2P07205 417 aa18.21■□□□□ 0.51
SCRIB-208ENST00000546337 MUM1L1Q5H9M0 696 aa18.21■□□□□ 0.51
SCRIB-208ENST00000546337 RRP36Q96EU6 259 aaKnown RBP18.21■□□□□ 0.51
SCRIB-208ENST00000546337 MPHOSPH6Q99547 160 aaKnown RBP18.21■□□□□ 0.51
SCRIB-208ENST00000546337 UNC93B1Q9H1C4 597 aa18.21■□□□□ 0.51
SCRIB-208ENST00000546337 CPVLQ9H3G5 476 aa18.21■□□□□ 0.51
SCRIB-208ENST00000546337 BRPF3Q9ULD4 1205 aa18.21■□□□□ 0.51
SCRIB-208ENST00000546337 KLF18A0A0U1RQI7 1052 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 ANKRD1Q15327 319 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 C8orf34Q49A92 452 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 NSMFQ6X4W1 530 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 RNF207Q6ZRF8 634 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 TMTC3Q6ZXV5 915 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 ANKLE1Q8NAG6 615 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 DNERQ8NFT8 737 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 BRF1Q92994 677 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 ZNF274Q96GC6 653 aaPredicted RBP18.2■□□□□ 0.5
SCRIB-208ENST00000546337 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
SCRIB-208ENST00000546337 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 PCDHA1Q9Y5I3 950 aa18.2■□□□□ 0.5
SCRIB-208ENST00000546337 HTTP42858 3142 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 CYBAP13498 195 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 CYP2C19P33261 490 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 BAATQ14032 418 aaPredicted RBP18.19■□□□□ 0.5
SCRIB-208ENST00000546337 RTN1Q16799 776 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 SLC35G1Q2M3R5 365 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 SRBD1Q8N5C6 995 aaKnown RBP18.19■□□□□ 0.5
SCRIB-208ENST00000546337 MORC4Q8TE76 937 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 U2AF1L4Q8WU68 220 aaKnown RBP18.19■□□□□ 0.5
SCRIB-208ENST00000546337 TCEANC2Q96MN5 208 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 PIGSQ96S52 555 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 ABHD16BQ9H3Z7 469 aa18.19■□□□□ 0.5
SCRIB-208ENST00000546337 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
SCRIB-208ENST00000546337 NID2Q14112 1375 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 hCG_1984214I3L0E3 225 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 NFIBO00712 420 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 SEPT4O43236 478 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 TRIM32Q13049 653 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 USH1GQ495M9 461 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 ZNF713Q8N859 430 aaPredicted RBP18.18■□□□□ 0.5
SCRIB-208ENST00000546337 MYL10Q9BUA6 226 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 PDRG1Q9NUG6 133 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
SCRIB-208ENST00000546337 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
SCRIB-208ENST00000546337 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 GOLGA8BA8MQT2 603 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 CPA1P15085 419 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 METAP2P50579 478 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCRIB-208ENST00000546337 SOX10P56693 466 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
SCRIB-208ENST00000546337 CNTN2Q02246 1040 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 FGD4Q96M96 766 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 DEFB118Q96PH6 123 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
SCRIB-208ENST00000546337 PTPDC1A2A3K4 754 aa18.16■□□□□ 0.5
SCRIB-208ENST00000546337 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
SCRIB-208ENST00000546337 SOWAHBA6NEL2 793 aa18.16■□□□□ 0.5
SCRIB-208ENST00000546337 SEC24BO95487 1268 aa18.16■□□□□ 0.5
SCRIB-208ENST00000546337 TFRCP02786 760 aaKnown RBP18.16■□□□□ 0.5
SCRIB-208ENST00000546337 APOBRQ0VD83 1088 aa18.16■□□□□ 0.5
SCRIB-208ENST00000546337 HOMER1Q86YM7 354 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms