RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CYTH3O43739 400 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 TRAF1Q13077 416 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 SLC35G1Q2M3R5 365 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 MFSD14CQ5VZR4 134 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 TMTC3Q6ZXV5 915 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 TRIB2Q92519 343 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 MTMR8Q96EF0 704 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 ZNF333Q96JL9 665 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 SPZ1Q9BXG8 430 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 AMNQ9BXJ7 453 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 AGXT2Q9BYV1 514 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 SEC63Q9UGP8 760 aaKnown RBP19.51■□□□□ 0.71
LTBR-215ENST00000546296 ABCB11O95342 1321 aa19.51■□□□□ 0.71
LTBR-215ENST00000546296 PNMA6FA0A0J9YX94 578 aa19.5■□□□□ 0.71
LTBR-215ENST00000546296 CCDC196A0A1B0GTZ2 297 aa19.5■□□□□ 0.71
LTBR-215ENST00000546296 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
LTBR-215ENST00000546296 RCAN1P53805 252 aa19.5■□□□□ 0.71
LTBR-215ENST00000546296 TOB2Q14106 344 aaPredicted RBP19.5■□□□□ 0.71
LTBR-215ENST00000546296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.5■□□□□ 0.71
LTBR-215ENST00000546296 LARP6Q9BRS8 491 aaKnown RBP19.5■□□□□ 0.71
LTBR-215ENST00000546296 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
LTBR-215ENST00000546296 MRPL11Q9Y3B7 192 aaKnown RBP19.5■□□□□ 0.71
LTBR-215ENST00000546296 PCDHA1Q9Y5I3 950 aa19.5■□□□□ 0.71
LTBR-215ENST00000546296 PFASO15067 1338 aa19.5■□□□□ 0.71
LTBR-215ENST00000546296 PTPDC1A2A3K4 754 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 NFIBO00712 420 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 NEK4P51957 841 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 ZNF792Q3KQV3 632 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 CLEC4DQ8WXI8 215 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 IL17RAQ96F46 866 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 MAML3Q96JK9 1138 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 TMEM106CQ9BVX2 250 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 FLRT1Q9NZU1 646 aa19.49■□□□□ 0.71
LTBR-215ENST00000546296 DIS3Q9Y2L1 958 aaKnown RBP19.49■□□□□ 0.71
LTBR-215ENST00000546296 CAPN15O75808 1086 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 TRIM32Q13049 653 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 BAATQ14032 418 aaPredicted RBP19.48■□□□□ 0.71
LTBR-215ENST00000546296 ANKRD1Q15327 319 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 OLFML2BQ68BL8 750 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 RNF207Q6ZRF8 634 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 MCF2L2Q86YR7 1114 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 CYP39A1Q9NYL5 469 aa19.48■□□□□ 0.71
LTBR-215ENST00000546296 DOCK3Q8IZD9 2030 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 DNAJC25-GNG10A0A024R161 153 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 PPP1R11O60927 126 aaPredicted RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 CCL5P13501 91 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 PRKAR2AP13861 404 aaKnown RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 CALML3P27482 149 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 PDIA3P30101 505 aaKnown RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 CYP2C19P33261 490 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 ADD1P35611 737 aaKnown RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 EVCP57679 992 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 CCT2P78371 535 aaKnown RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 CNTN2Q02246 1040 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 MTFR1Q15390 333 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 ZNF274Q96GC6 653 aaPredicted RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 RNF208Q9H0X6 261 aa19.47■□□□□ 0.71
LTBR-215ENST00000546296 ALDH8A1Q9H2A2 487 aaPredicted RBP19.47■□□□□ 0.71
LTBR-215ENST00000546296 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
LTBR-215ENST00000546296 hCG_1642624A0A1W2PR95 340 aa19.46■□□□□ 0.71
LTBR-215ENST00000546296 CDC27P30260 824 aa19.46■□□□□ 0.71
LTBR-215ENST00000546296 CACNB2Q08289 660 aaPredicted RBP19.46■□□□□ 0.71
LTBR-215ENST00000546296 RGS22Q8NE09 1264 aa19.46■□□□□ 0.71
LTBR-215ENST00000546296 UNC93B1Q9H1C4 597 aa19.46■□□□□ 0.71
LTBR-215ENST00000546296 HMX1Q9NP08 348 aaPredicted RBP19.46■□□□□ 0.71
LTBR-215ENST00000546296 FAM217BQ9NTX9 383 aaPredicted RBP19.46■□□□□ 0.71
LTBR-215ENST00000546296 HTTP42858 3142 aa19.45■□□□□ 0.7
LTBR-215ENST00000546296 RBM25P49756 843 aaKnown RBP19.45■□□□□ 0.7
LTBR-215ENST00000546296 AK2P54819 239 aa19.45■□□□□ 0.7
LTBR-215ENST00000546296 STK3Q13188 491 aa19.45■□□□□ 0.7
LTBR-215ENST00000546296 FAM133AQ8N9E0 248 aa19.45■□□□□ 0.7
LTBR-215ENST00000546296 TINF2Q9BSI4 451 aa19.45■□□□□ 0.7
LTBR-215ENST00000546296 V9GY48 417 aaPredicted RBP19.45■□□□□ 0.7
LTBR-215ENST00000546296 CFBP00751 764 aa19.44■□□□□ 0.7
LTBR-215ENST00000546296 CNGA1P29973 690 aa19.44■□□□□ 0.7
LTBR-215ENST00000546296 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
LTBR-215ENST00000546296 SLC30A10Q6XR72 485 aa19.44■□□□□ 0.7
LTBR-215ENST00000546296 NOL8Q76FK4 1167 aaKnown RBP19.44■□□□□ 0.7
LTBR-215ENST00000546296 ZNF467Q7Z7K2 595 aaPredicted RBP19.44■□□□□ 0.7
LTBR-215ENST00000546296 BACH2Q9BYV9 841 aa19.44■□□□□ 0.7
LTBR-215ENST00000546296 NCOA5Q9HCD5 579 aaKnown RBP19.44■□□□□ 0.7
LTBR-215ENST00000546296 RPTORQ8N122 1335 aa19.44■□□□□ 0.7
LTBR-215ENST00000546296 ZNF236Q9UL36 1845 aa19.44■□□□□ 0.7
LTBR-215ENST00000546296 SOWAHBA6NEL2 793 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 CPLX1O14810 134 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 SOX10P56693 466 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 AKAP17AQ02040 695 aaKnown RBP19.43■□□□□ 0.7
LTBR-215ENST00000546296 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 HEATR3Q7Z4Q2 680 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 MSL3Q8N5Y2 521 aaKnown RBP19.43■□□□□ 0.7
LTBR-215ENST00000546296 TBC1D5Q92609 795 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 PURBQ96QR8 312 aaKnown RBP19.43■□□□□ 0.7
LTBR-215ENST00000546296 MAF1Q9H063 256 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.43■□□□□ 0.7
LTBR-215ENST00000546296 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
LTBR-215ENST00000546296 ADD3Q9UEY8 706 aaKnown RBP19.43■□□□□ 0.7
LTBR-215ENST00000546296 CNPY2Q9Y2B0 182 aa19.43■□□□□ 0.7
LTBR-215ENST00000546296 CNTNAP5Q8WYK1 1306 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms