RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 NR1I2O75469 434 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 XBP1P17861 261 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 RXRAP19793 462 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 PDCP20941 246 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 CDC27P30260 824 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 HMGCS2P54868 508 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 BTNL9Q6UXG8 535 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 TMTC3Q6ZXV5 915 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 PRRT2Q7Z6L0 340 aaPredicted RBP11.24□□□□□ -0.61
DDB1-225ENST00000545930 CCDC144CPQ8IYA2 1237 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 NECAB1Q8N987 351 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 RRP36Q96EU6 259 aaKnown RBP11.24□□□□□ -0.61
DDB1-225ENST00000545930 WNK4Q96J92 1243 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 RNF26Q9BY78 433 aaPredicted RBP11.24□□□□□ -0.61
DDB1-225ENST00000545930 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 PNMA2Q9UL42 364 aa11.24□□□□□ -0.61
DDB1-225ENST00000545930 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
DDB1-225ENST00000545930 PHIPQ8WWQ0 1821 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 MANSC4A6NHS7 340 aaPredicted RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 LCE2BO14633 110 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 DEXIO95424 95 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 LARGE1O95461 756 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 HOXA7P31268 230 aaPredicted RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 OTUD7BQ6GQQ9 843 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 KCTD1Q719H9 257 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 CCDC84Q86UT8 332 aaPredicted RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 SPICE1Q8N0Z3 855 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 FAM177A1Q8N128 213 aaPredicted RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 PXYLP1Q8TE99 480 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
DDB1-225ENST00000545930 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 STK36Q9NRP7 1315 aa11.23□□□□□ -0.61
DDB1-225ENST00000545930 hCG_1984214I3L0E3 225 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
DDB1-225ENST00000545930 VCAM1P19320 739 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 COG2Q14746 738 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 NTRK3Q16288 839 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 DEFB115Q30KQ5 88 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 GADL1Q6ZQY3 521 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 CATSPERGQ6ZRH7 1159 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 RAB11FIP4Q86YS3 637 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 ZNF713Q8N859 430 aaPredicted RBP11.22□□□□□ -0.61
DDB1-225ENST00000545930 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 RPAP3Q9H6T3 665 aaPredicted RBP11.22□□□□□ -0.61
DDB1-225ENST00000545930 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 SLC45A1Q9Y2W3 748 aa11.22□□□□□ -0.61
DDB1-225ENST00000545930 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 ZBED4O75132 1171 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 FLOT1O75955 427 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 ADH1BP00325 375 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 SLC10A3P09131 477 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 SLC19A1P41440 591 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 SREBF2Q12772 1141 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 TRIM29Q14134 588 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 SYDE2Q5VT97 1194 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 ADGRF4Q8IZF3 695 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 SRBD1Q8N5C6 995 aaKnown RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 SMARCC2Q8TAQ2 1214 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 CCDC12Q8WUD4 166 aaPredicted RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 SLC26A6Q9BXS9 759 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 UBA5Q9GZZ9 404 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.61
DDB1-225ENST00000545930 ZCCHC17Q9NP64 241 aaKnown RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
DDB1-225ENST00000545930 BAZ2BQ9UIF8 2168 aaKnown RBP11.2□□□□□ -0.62
DDB1-225ENST00000545930 MYH6P13533 1939 aa11.2□□□□□ -0.62
DDB1-225ENST00000545930 CCL15-CCL14A0A0B4J2E2 113 aa11.2□□□□□ -0.62
DDB1-225ENST00000545930 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
DDB1-225ENST00000545930 PTPDC1A2A3K4 754 aa11.2□□□□□ -0.62
DDB1-225ENST00000545930 TESPA1A2RU30 521 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms