RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 PDE4AP27815 886 aa23.33■■□□□ 1.33
CHD4-213ENST00000545584 KCNA10Q16322 511 aa23.33■■□□□ 1.33
CHD4-213ENST00000545584 GPATCH4Q5T3I0 446 aaKnown RBP23.33■■□□□ 1.33
CHD4-213ENST00000545584 NOL8Q76FK4 1167 aaKnown RBP23.33■■□□□ 1.33
CHD4-213ENST00000545584 KRT23Q9C075 422 aa23.33■■□□□ 1.33
CHD4-213ENST00000545584 KAT14Q9H8E8 782 aa23.33■■□□□ 1.33
CHD4-213ENST00000545584 ADD3Q9UEY8 706 aaKnown RBP23.33■■□□□ 1.33
CHD4-213ENST00000545584 LAMA4Q16363 1823 aa23.33■■□□□ 1.32
CHD4-213ENST00000545584 B4E1Z4 1266 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 SNHG28P0DPA3 235 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 CST5P28325 142 aaPredicted RBP23.32■■□□□ 1.32
CHD4-213ENST00000545584 GJA9P57773 515 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 TNFAIP2Q03169 654 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 GPR153Q6NV75 609 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 RUFY2Q8WXA3 655 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 GLT1D1Q96MS3 346 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 KATNBL1Q9H079 304 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 PDLIM7Q9NR12 457 aa23.32■■□□□ 1.32
CHD4-213ENST00000545584 PQBP1O60828 265 aaKnown RBP23.31■■□□□ 1.32
CHD4-213ENST00000545584 CLTBP09497 229 aa23.31■■□□□ 1.32
CHD4-213ENST00000545584 BAATQ14032 418 aaPredicted RBP23.31■■□□□ 1.32
CHD4-213ENST00000545584 GNASQ5JWF2 1037 aa23.31■■□□□ 1.32
CHD4-213ENST00000545584 PNMA1Q8ND90 353 aa23.31■■□□□ 1.32
CHD4-213ENST00000545584 VTI1AQ96AJ9 217 aa23.31■■□□□ 1.32
CHD4-213ENST00000545584 ZSCAN10Q96SZ4 725 aaPredicted RBP23.31■■□□□ 1.32
CHD4-213ENST00000545584 UPF3AQ9H1J1 476 aaKnown RBP23.31■■□□□ 1.32
CHD4-213ENST00000545584 RAD50Q92878 1312 aa23.31■■□□□ 1.32
CHD4-213ENST00000545584 PTPDC1A2A3K4 754 aa23.3■■□□□ 1.32
CHD4-213ENST00000545584 MYADML2A6NDP7 307 aa23.3■■□□□ 1.32
CHD4-213ENST00000545584 ADCY6O43306 1168 aa23.3■■□□□ 1.32
CHD4-213ENST00000545584 GSPT1P15170 499 aaKnown RBP23.3■■□□□ 1.32
CHD4-213ENST00000545584 CCSAPQ6IQ19 270 aaPredicted RBP23.3■■□□□ 1.32
CHD4-213ENST00000545584 ELP1O95163 1332 aa23.3■■□□□ 1.32
CHD4-213ENST00000545584 DCDC2CA8MYV0 355 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 ASGR1P07306 291 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 DNAH12Q6ZR08 3092 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 SH3RF1Q7Z6J0 888 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 ANKS1AQ92625 1134 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 BADQ92934 168 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 TOX2Q96NM4 488 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 UBAC1Q9BSL1 405 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 ZSWIM5Q9P217 1185 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 WDR19Q8NEZ3 1342 aa23.29■■□□□ 1.32
CHD4-213ENST00000545584 LOC102724159A0A0B4J2E5 919 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 TRIM43BA6NCK2 446 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 NFIBO00712 420 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 GOLGA8HP0CJ92 632 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 PWP2Q15269 919 aaKnown RBP23.28■■□□□ 1.32
CHD4-213ENST00000545584 IQSEC1Q6DN90 963 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 RNF207Q6ZRF8 634 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 EEPD1Q7L9B9 569 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 ANKRD33Q7Z3H0 272 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 TRIM43Q96BQ3 446 aaPredicted RBP23.28■■□□□ 1.32
CHD4-213ENST00000545584 MPHOSPH6Q99547 160 aaKnown RBP23.28■■□□□ 1.32
CHD4-213ENST00000545584 AP5M1Q9H0R1 490 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 VTA1Q9NP79 307 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 TMEM39AQ9NV64 488 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 TNKSO95271 1327 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 MROH7Q68CQ1 1323 aa23.28■■□□□ 1.32
CHD4-213ENST00000545584 LTBP2Q14767 1821 aa23.27■■□□□ 1.32
CHD4-213ENST00000545584 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.27■■□□□ 1.32
CHD4-213ENST00000545584 RAG1P15918 1043 aa23.27■■□□□ 1.32
CHD4-213ENST00000545584 CALML3P27482 149 aa23.27■■□□□ 1.32
CHD4-213ENST00000545584 ASPRV1Q53RT3 343 aa23.27■■□□□ 1.32
CHD4-213ENST00000545584 ENAHQ8N8S7 591 aaPredicted RBP23.27■■□□□ 1.32
CHD4-213ENST00000545584 UBA5Q9GZZ9 404 aa23.27■■□□□ 1.32
CHD4-213ENST00000545584 ASTN1O14525 1302 aa23.27■■□□□ 1.32
CHD4-213ENST00000545584 KIAA0355O15063 1070 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 ZEB2O60315 1214 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 ALDH5A1P51649 535 aaPredicted RBP23.26■■□□□ 1.31
CHD4-213ENST00000545584 NKX3-2P78367 333 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 IRX5P78411 483 aaPredicted RBP23.26■■□□□ 1.31
CHD4-213ENST00000545584 TRDNQ13061 729 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 TLK2Q86UE8 772 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 FBXO16Q8IX29 292 aaPredicted RBP23.26■■□□□ 1.31
CHD4-213ENST00000545584 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 CLEC4DQ8WXI8 215 aa23.26■■□□□ 1.31
CHD4-213ENST00000545584 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
CHD4-213ENST00000545584 GNEQ9Y223 722 aaKnown RBP23.26■■□□□ 1.31
CHD4-213ENST00000545584 A0A0U1RQG5 324 aaPredicted RBP23.25■■□□□ 1.31
CHD4-213ENST00000545584 PARP1P09874 1014 aaKnown RBP23.25■■□□□ 1.31
CHD4-213ENST00000545584 IFIT1BQ5T764 474 aaKnown RBP23.25■■□□□ 1.31
CHD4-213ENST00000545584 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
CHD4-213ENST00000545584 DEFB123Q8N688 67 aa23.25■■□□□ 1.31
CHD4-213ENST00000545584 IL25Q9H293 177 aa23.25■■□□□ 1.31
CHD4-213ENST00000545584 PDGFCQ9NRA1 345 aa23.25■■□□□ 1.31
CHD4-213ENST00000545584 Q9Y3F1 56 aa23.25■■□□□ 1.31
CHD4-213ENST00000545584 DDX49Q9Y6V7 483 aaKnown RBP23.25■■□□□ 1.31
CHD4-213ENST00000545584 SZT2Q5T011 3432 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 B4DLN1 442 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 DYNC1LI2O43237 492 aaPredicted RBP23.24■■□□□ 1.31
CHD4-213ENST00000545584 DHX16O60231 1041 aaKnown RBP23.24■■□□□ 1.31
CHD4-213ENST00000545584 SMPD1P17405 629 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 CHMLP26374 656 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 MRPL12P52815 198 aaKnown RBP23.24■■□□□ 1.31
CHD4-213ENST00000545584 RPS6P62753 249 aaKnown RBP23.24■■□□□ 1.31
CHD4-213ENST00000545584 BEX3Q00994 111 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 FAAP100Q0VG06 881 aa23.24■■□□□ 1.31
CHD4-213ENST00000545584 CDC37Q16543 378 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms