RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CTAGE5O15320 804 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 NOVP48745 357 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 CNTN2Q02246 1040 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 NECTIN1Q15223 517 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 RRP12Q5JTH9 1297 aaKnown RBP14.64□□□□□ -0.07
ACTN1-206ENST00000544964 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 CREB3L3Q68CJ9 461 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 MFSD6Q6ZSS7 791 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 ANKRD35Q8N283 1001 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 FAM133AQ8N9E0 248 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 FAM161BQ96MY7 647 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 ABHD16BQ9H3Z7 469 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 ACAD9Q9H845 621 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 A1CFQ9NQ94 594 aaKnown RBP14.64□□□□□ -0.07
ACTN1-206ENST00000544964 RNF146Q9NTX7 359 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 CTDP1Q9Y5B0 961 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-206ENST00000544964 NEDD4P46934 1319 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 SPTBN5Q9NRC6 3674 aaKnown RBP14.63□□□□□ -0.07
ACTN1-206ENST00000544964 PLA2G6O60733 806 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 FDX1P10109 184 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 MCCP23508 829 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 SLC1A4P43007 532 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 FAAP100Q0VG06 881 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 KCNA10Q16322 511 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 CCDC144BQ3MJ40 725 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 KCTD1Q719H9 257 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 FAM160B2Q86V87 743 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 STAG1Q8WVM7 1258 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 CHMP4CQ96CF2 233 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 AGBL1Q96MI9 1066 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 TOX2Q96NM4 488 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 USP26Q9BXU7 913 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 STARD7Q9NQZ5 370 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 TBX21Q9UL17 535 aa14.63□□□□□ -0.07
ACTN1-206ENST00000544964 CHD9Q3L8U1 2897 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 SOWAHBA6NEL2 793 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 TSPY2A6NKD2 308 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 DLL1O00548 723 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 ORC4O43929 436 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 RANBP6O60518 1105 aaKnown RBP14.62□□□□□ -0.07
ACTN1-206ENST00000544964 FGRP09769 529 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
ACTN1-206ENST00000544964 GJA9P57773 515 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 ZNF697Q5TEC3 545 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 RNF41Q9H4P4 317 aaPredicted RBP14.62□□□□□ -0.07
ACTN1-206ENST00000544964 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
ACTN1-206ENST00000544964 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
ACTN1-206ENST00000544964 DDX49Q9Y6V7 483 aaKnown RBP14.62□□□□□ -0.07
ACTN1-206ENST00000544964 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-206ENST00000544964 B4E1Z4 1266 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 E7EWF7 191 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 ASGR1P07306 291 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 PTGS1P23219 599 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 HSPA4P34932 840 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 SNAP25P60880 206 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 NKX3-2P78367 333 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 SMAD3P84022 425 aaKnown RBP14.61□□□□□ -0.07
ACTN1-206ENST00000544964 MUM1L1Q5H9M0 696 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 RNF20Q5VTR2 975 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 RASEFQ8IZ41 740 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 TTYH1Q9H313 450 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-206ENST00000544964 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 ELP1O95163 1332 aa14.61□□□□□ -0.07
ACTN1-206ENST00000544964 RAG1P15918 1043 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 CDK7P50613 346 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 FPGSQ05932 587 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 IKQ13123 557 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-206ENST00000544964 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 PPP4R3BQ5MIZ7 849 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 RCSD1Q6JBY9 416 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 CCDC174Q6PII3 467 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 RNPC3Q96LT9 517 aaKnown RBP14.6□□□□□ -0.07
ACTN1-206ENST00000544964 TMEM39AQ9NV64 488 aa14.6□□□□□ -0.07
ACTN1-206ENST00000544964 MYO9BQ13459 2157 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 DCDC2CA8MYV0 355 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 EPB41L2O43491 1005 aaKnown RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 KDM4AO75164 1064 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 PCP11498 1178 aaKnown RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 ALAS1P13196 640 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 FAM126BQ8IXS8 530 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 PCSK9Q8NBP7 692 aaKnown RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 ESR2Q92731 530 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 GLT1D1Q96MS3 346 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 TRERF1Q96PN7 1200 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 CDX2Q99626 313 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 KRT23Q9C075 422 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 CNNM2Q9H8M5 875 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 CYP39A1Q9NYL5 469 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 MTMR7Q9Y216 660 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 GNEQ9Y223 722 aaKnown RBP14.59□□□□□ -0.07
ACTN1-206ENST00000544964 SNX14Q9Y5W7 946 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 GBF1Q92538 1859 aa14.59□□□□□ -0.07
ACTN1-206ENST00000544964 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.07
ACTN1-206ENST00000544964 A0A0U1RQG5 324 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms