RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 SLCO6A1Q86UG4 719 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 KSR1Q8IVT5 923 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 NAT16Q8N8M0 369 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 JMYQ8N9B5 988 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 ZBTB38Q8NAP3 1195 aaPredicted RBP3.57□□□□□ -1.84
YBX3-214ENST00000544501 TMEM52Q8NDY8 209 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 NLGN2Q8NFZ4 835 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 ABHD4Q8TB40 342 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 BTN2A2Q8WVV5 523 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 MYLIPQ8WY64 445 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 AARSD1Q9BTE6 412 aaKnown RBP3.57□□□□□ -1.84
YBX3-214ENST00000544501 SP110Q9HB58 689 aa3.57□□□□□ -1.84
YBX3-214ENST00000544501 KDM2BQ8NHM5 1336 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 TRAV20A0A0B4J274 112 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 NOTOA8MTQ0 251 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 ADCY3O60266 1144 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 USP2O75604 605 aaPredicted RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 SNRPB2P08579 225 aaKnown RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 L1CAMP32004 1257 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 CEBPAP49715 358 aaPredicted RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 GFRA1P56159 465 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 CORO7P57737 925 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 CYP4F3Q08477 520 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 MAP4K2Q12851 820 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 BMS1Q14692 1282 aaKnown RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 SLC14A2Q15849 920 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 ACBD5Q5T8D3 534 aaPredicted RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 E4F1Q66K89 784 aaPredicted RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 GALNT18Q6P9A2 607 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 CEP128Q6ZU80 1094 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 NOP9Q86U38 636 aaKnown RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 SCUBE1Q8IWY4 988 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 NPLOC4Q8TAT6 608 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 THAP3Q8WTV1 239 aaPredicted RBP3.56□□□□□ -1.84
YBX3-214ENST00000544501 KCTD13Q8WZ19 329 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 ASIC4Q96FT7 647 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 KIRREL1Q96J84 757 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 SLC26A8Q96RN1 970 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 MMP19Q99542 508 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 DNAJC7Q99615 494 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 LGR4Q9BXB1 951 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 CRTAC1Q9NQ79 661 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 ARHGEF4Q9NR80 690 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 PFDN2Q9UHV9 154 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 ACSL6Q9UKU0 697 aa3.56□□□□□ -1.84
YBX3-214ENST00000544501 CCDC163A0A0D9SF12 145 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 NPHP3-ACAD11A0A0J9YXS1 232 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 DIAPH1O60610 1272 aaKnown RBP3.55□□□□□ -1.84
YBX3-214ENST00000544501 PAPLNO95428 1278 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 THBDP07204 575 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 PABPC1P11940 636 aaKnown RBP3.55□□□□□ -1.84
YBX3-214ENST00000544501 PLS3P13797 630 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 GRIA2P42262 883 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 KCNJ6P48051 423 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 ERVFC1P60507 584 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 KCNAB2Q13303 367 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 LAPTM5Q13571 262 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 HSF5Q4G112 596 aaPredicted RBP3.55□□□□□ -1.84
YBX3-214ENST00000544501 TMEM67Q5HYA8 995 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 SLC35F1Q5T1Q4 408 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 NSMFQ6X4W1 530 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 NLRX1Q86UT6 975 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 ZSWIM9Q86XI8 627 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 JAMLQ86YT9 394 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 TMEM145Q8NBT3 493 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 KREMEN2Q8NCW0 462 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 FRS2Q8WU20 508 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 C1orf159Q96HA4 380 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 IPO9Q96P70 1041 aaKnown RBP3.55□□□□□ -1.84
YBX3-214ENST00000544501 IER2Q9BTL4 223 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 GPRC5CQ9NQ84 441 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 NPFFR2Q9Y5X5 522 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 TAF6LQ9Y6J9 622 aa3.55□□□□□ -1.84
YBX3-214ENST00000544501 A0A1W2PQ27 194 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 A0A1W2PQ64 194 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 A0A1W2PQC6 194 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 A0A1W2PQD8 194 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 PRODHO43272 600 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 DLX3O60479 287 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 NPHS1O60500 1241 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 PSPNO60542 156 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 GLI1P08151 1106 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 FAM153BP0C7A2 387 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 PNLIPP16233 465 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 TAL1P17542 331 aaPredicted RBP3.54□□□□□ -1.84
YBX3-214ENST00000544501 ECI1P42126 302 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 GTF2A2P52657 109 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 SF1Q15637 639 aaKnown RBP3.54□□□□□ -1.84
YBX3-214ENST00000544501 KCNMB1Q16558 191 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 TIGD5Q53EQ6 642 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 C2orf27AQ580R0 203 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 XP32Q5T750 250 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 FYB2Q5VWT5 728 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 RSPO2Q6UXX9 243 aaPredicted RBP3.54□□□□□ -1.84
YBX3-214ENST00000544501 LILRB2Q8N423 598 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 ZSWIM2Q8NEG5 633 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 OSBP2Q969R2 916 aa3.54□□□□□ -1.84
YBX3-214ENST00000544501 SHISA4Q96DD7 197 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms