RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 TAOK2Q9UL54 1235 aa20.27■□□□□ 0.83
CCT4-204ENST00000544079 GOLGA6L10A6NI86 522 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
CCT4-204ENST00000544079 A1BGP04217 495 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 RPN1P04843 607 aaKnown RBP20.26■□□□□ 0.83
CCT4-204ENST00000544079 SNRPA1P09661 255 aaKnown RBP20.26■□□□□ 0.83
CCT4-204ENST00000544079 GBP2P32456 591 aaPredicted RBP20.26■□□□□ 0.83
CCT4-204ENST00000544079 ZAP70P43403 619 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 CFAP221Q4G0U5 840 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 OXER1Q8TDS5 423 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 SCLT1Q96NL6 688 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 HAUS2Q9NVX0 235 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 LRWD1Q9UFC0 647 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 CAPN6Q9Y6Q1 641 aa20.26■□□□□ 0.83
CCT4-204ENST00000544079 TBC1D8BQ0IIM8 1120 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 BIRC3Q13489 604 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 PPP2R5BQ15173 497 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 CCDC96Q2M329 555 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 TMTC2Q8N394 836 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 RASSF8Q8NHQ8 419 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 CCHCR1Q8TD31 782 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 CCDC42Q96M95 316 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 EBF2Q9HAK2 575 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 CHD4Q14839 1912 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 PJA2O43164 708 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 TRIM21P19474 475 aaKnown RBP20.25■□□□□ 0.83
CCT4-204ENST00000544079 PRCPP42785 496 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 RIPK1Q13546 671 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 CACNA2D3Q8IZS8 1091 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 RNF26Q9BY78 433 aaPredicted RBP20.25■□□□□ 0.83
CCT4-204ENST00000544079 KRT23Q9C075 422 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 SLC12A6Q9UHW9 1150 aa20.25■□□□□ 0.83
CCT4-204ENST00000544079 GRID2IPA4D2P6 1211 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 ANKRD33BA6NCL7 494 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 CARSP49589 748 aaKnown RBP20.24■□□□□ 0.83
CCT4-204ENST00000544079 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
CCT4-204ENST00000544079 CDC37Q16543 378 aaPredicted RBP20.24■□□□□ 0.83
CCT4-204ENST00000544079 SEC16BQ96JE7 1060 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 RBM12Q9NTZ6 932 aaKnown RBP20.24■□□□□ 0.83
CCT4-204ENST00000544079 NFU1Q9UMS0 254 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 PCDHA13Q9Y5I0 950 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 ZNF263O14978 683 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 COBLO75128 1261 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 LTKP29376 864 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 KRT2P35908 639 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 NFRKBQ6P4R8 1299 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 HINFPQ9BQA5 517 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 IFIH1Q9BYX4 1025 aaKnown RBP20.24■□□□□ 0.83
CCT4-204ENST00000544079 AGPAT5Q9NUQ2 364 aa20.24■□□□□ 0.83
CCT4-204ENST00000544079 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
CCT4-204ENST00000544079 RASSF10A6NK89 507 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 MATR3P43243 847 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCT4-204ENST00000544079 KCNB1Q14721 858 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 NAA25Q14CX7 972 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 ZNF512BQ96KM6 892 aaPredicted RBP20.23■□□□□ 0.83
CCT4-204ENST00000544079 BLZF1Q9H2G9 400 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 HOMER3Q9NSC5 361 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 LEMD3Q9Y2U8 911 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 HEXIM1O94992 359 aaKnown RBP20.23■□□□□ 0.83
CCT4-204ENST00000544079 ATP6V1G2O95670 118 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 GLI1P08151 1106 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 GSTA1P08263 222 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 FAM153BP0C7A2 387 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 CYP27A1Q02318 531 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 FAM153CQ494X1 144 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 RNF10Q8N5U6 811 aaKnown RBP20.23■□□□□ 0.83
CCT4-204ENST00000544079 ERGIC2Q96RQ1 377 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 SH3GL3Q99963 347 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 SLC24A3Q9HC58 644 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 PPANQ9NQ55 473 aaKnown RBP20.23■□□□□ 0.83
CCT4-204ENST00000544079 FAM153AQ9UHL3 310 aa20.23■□□□□ 0.83
CCT4-204ENST00000544079 SCARF1Q14162 830 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 AGBL2Q5U5Z8 902 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 RUFY4Q6ZNE9 571 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 ZNF483Q8TF39 744 aaPredicted RBP20.22■□□□□ 0.83
CCT4-204ENST00000544079 CCT6BQ92526 530 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 CUL5Q93034 780 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 TATDN2Q93075 761 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 MTRQ99707 1265 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 EPB41L5Q9HCM4 733 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 SPATS2LQ9NUQ6 558 aaKnown RBP20.22■□□□□ 0.83
CCT4-204ENST00000544079 PLAGL2Q9UPG8 496 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 MYH6P13533 1939 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 GCOM1H8Y6P7 765 aaPredicted RBP20.22■□□□□ 0.83
CCT4-204ENST00000544079 MYL1P05976 194 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 MYZAPP0CAP1 466 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 ADORA1P30542 326 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 SLC39A6Q13433 755 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 FAM114A1Q8IWE2 563 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 CCDC47Q96A33 483 aaKnown RBP20.22■□□□□ 0.83
CCT4-204ENST00000544079 PLAAQ9Y263 795 aa20.22■□□□□ 0.83
CCT4-204ENST00000544079 NUP188Q5SRE5 1749 aa20.21■□□□□ 0.83
CCT4-204ENST00000544079 MOCS3O95396 460 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms