RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 IL27Q8NEV9 243 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 MCOLN1Q9GZU1 580 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 PTCH2Q9Y6C5 1203 aa19.83■□□□□ 0.77
RABGGTA-203ENST00000543002 PLXNB2O15031 1838 aa19.83■□□□□ 0.76
RABGGTA-203ENST00000543002 ABCB11O95342 1321 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 CNTNAP5Q8WYK1 1306 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 PPP1R11O60927 126 aaPredicted RBP19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 RGS2P41220 211 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 CCT2P78371 535 aaKnown RBP19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 TRAF1Q13077 416 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 RAET1EQ8TD07 263 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 PIBF1Q8WXW3 757 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 ZNF236Q9UL36 1845 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 SMCHD1A6NHR9 2005 aa19.82■□□□□ 0.76
RABGGTA-203ENST00000543002 HOXC6P09630 235 aa19.81■□□□□ 0.76
RABGGTA-203ENST00000543002 XRCC5P13010 732 aaKnown RBP19.81■□□□□ 0.76
RABGGTA-203ENST00000543002 CYP2B6P20813 491 aa19.81■□□□□ 0.76
RABGGTA-203ENST00000543002 CLEC4DQ8WXI8 215 aa19.81■□□□□ 0.76
RABGGTA-203ENST00000543002 NCOA5Q9HCD5 579 aaKnown RBP19.81■□□□□ 0.76
RABGGTA-203ENST00000543002 SEC63Q9UGP8 760 aaKnown RBP19.81■□□□□ 0.76
RABGGTA-203ENST00000543002 NFIBO00712 420 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 PFKFB2O60825 505 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 COBLO75128 1261 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 STK3Q13188 491 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 NTRK3Q16288 839 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 NOL8Q76FK4 1167 aaKnown RBP19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 DPP9Q86TI2 863 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 ANKRD35Q8N283 1001 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 PXYLP1Q8TE99 480 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 APBA2Q99767 749 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 SLKQ9H2G2 1235 aaPredicted RBP19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 A1CFQ9NQ94 594 aaKnown RBP19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 SLC5A4Q9NY91 659 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 MRPL11Q9Y3B7 192 aaKnown RBP19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 PCDHA1Q9Y5I3 950 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 MYH6P13533 1939 aa19.8■□□□□ 0.76
RABGGTA-203ENST00000543002 DNAJC25-GNG10A0A024R161 153 aa19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 ADCY3O60266 1144 aa19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 NPLOC4Q8TAT6 608 aa19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 MAF1Q9H063 256 aa19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 V9GY48 417 aaPredicted RBP19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 PFASO15067 1338 aa19.79■□□□□ 0.76
RABGGTA-203ENST00000543002 hCG_1642624A0A1W2PR95 340 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 PGK2P07205 417 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 IFNAR1P17181 557 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 GRK4P32298 578 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 SCRN1Q12765 414 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 ME3Q16798 604 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 ZNF792Q3KQV3 632 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 NSMFQ6X4W1 530 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 TRMT44Q8IYL2 757 aaKnown RBP19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 SLAIN1Q8ND83 568 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 RGS22Q8NE09 1264 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 CYP39A1Q9NYL5 469 aa19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 DIS3Q9Y2L1 958 aaKnown RBP19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 ZNFX1Q9P2E3 1918 aaKnown RBP19.78■□□□□ 0.76
RABGGTA-203ENST00000543002 CPLX1O14810 134 aa19.77■□□□□ 0.76
RABGGTA-203ENST00000543002 PRPF3O43395 683 aaKnown RBP19.77■□□□□ 0.76
RABGGTA-203ENST00000543002 ST18O60284 1047 aa19.77■□□□□ 0.76
RABGGTA-203ENST00000543002 CPLX2Q6PUV4 134 aaKnown RBP19.77■□□□□ 0.76
RABGGTA-203ENST00000543002 MCF2L2Q86YR7 1114 aa19.77■□□□□ 0.76
RABGGTA-203ENST00000543002 RBM27Q9P2N5 1060 aaKnown RBP19.77■□□□□ 0.76
RABGGTA-203ENST00000543002 POTEB2H3BUK9 544 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 LARGE1O95461 756 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 ELNP15502 786 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 BAATQ14032 418 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 CCL14Q16627 93 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 SLC9C1Q4G0N8 1177 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 RNF207Q6ZRF8 634 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 FAM133AQ8N9E0 248 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 TRIB2Q92519 343 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 PHKBQ93100 1093 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 RNF26Q9BY78 433 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 PTPDC1A2A3K4 754 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 OPLAHO14841 1288 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 RPS6P62753 249 aaKnown RBP19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 OLFML2BQ68BL8 750 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 NECAB1Q8N987 351 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 SH3TC2Q8TF17 1288 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 GTF3C6Q969F1 213 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 MAML3Q96JK9 1138 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 ZSCAN31Q96LW9 406 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 FLRT1Q9NZU1 646 aa19.76■□□□□ 0.75
RABGGTA-203ENST00000543002 hCG_1984214I3L0E3 225 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 IGHA2P01877 340 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 HMGCRP04035 888 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 AKAP17AQ02040 695 aaKnown RBP19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 CNTN2Q02246 1040 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 GHRHRQ02643 423 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 PFKFB3Q16875 520 aaPredicted RBP19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 SLC30A10Q6XR72 485 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 HEATR3Q7Z4Q2 680 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 SAMD3Q8N6K7 520 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 ZNF713Q8N859 430 aaPredicted RBP19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 TBC1D5Q92609 795 aa19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 GPKOWQ92917 476 aaPredicted RBP eCLIP19.75■□□□□ 0.75
RABGGTA-203ENST00000543002 ARMC5Q96C12 935 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms