RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 AKAP2Q9Y2D5 859 aa5.83□□□□□ -1.48
LIMS1-214ENST00000542845 PIEZO1Q92508 2521 aa5.83□□□□□ -1.48
LIMS1-214ENST00000542845 IL16Q14005 1332 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 MYO5AQ9Y4I1 1855 aaKnown RBP5.82□□□□□ -1.48
LIMS1-214ENST00000542845 A0A1W2PRG0 241 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 SOWAHBA6NEL2 793 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 ADCY6O43306 1168 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 TRAK2O60296 914 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 B4GALT4O60513 344 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 LPXNO60711 386 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 KRT37O76014 449 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 CYP2C9P11712 490 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 STAT3P40763 770 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 ACVR2BQ13705 512 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 KIAA1755Q5JYT7 1200 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 TYW1BQ6NUM6 668 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 FAM117BQ6P1L5 589 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 TATDN1Q6P1N9 297 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 ADGRA1Q86SQ6 560 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 METTL16Q86W50 562 aaKnown RBP5.82□□□□□ -1.48
LIMS1-214ENST00000542845 HERC6Q8IVU3 1022 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 MIGA1Q8NAN2 632 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 PTCD2Q8WV60 388 aaKnown RBP5.82□□□□□ -1.48
LIMS1-214ENST00000542845 NLRP7Q8WX94 980 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 PBXIP1Q96AQ6 731 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 SERPINB13Q9UIV8 391 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 FOCADQ5VW36 1801 aa5.82□□□□□ -1.48
LIMS1-214ENST00000542845 PDS5AQ29RF7 1337 aaKnown RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 MCM3APO60318 1980 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 LCHNA4D1U4 455 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 A6NJR5 290 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 POLR3DP05423 398 aaPredicted RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 UBTFL1P0CB47 393 aaPredicted RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 CYP7A1P22680 504 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 PTGS1P23219 599 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 CST5P28325 142 aaPredicted RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 GUCY1A2P33402 732 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 MCAMP43121 646 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 KCNJ6P48051 423 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 GJA9P57773 515 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 CHMP4BP1P59074 171 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 PPP4CP60510 307 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 TNFAIP2Q03169 654 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 CLUL1Q15846 466 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 TTC6Q86TZ1 520 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 RIOX2Q8IUF8 465 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 SUGP1Q8IWZ8 645 aaKnown RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 PPP1R13LQ8WUF5 828 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 AGBL1Q96MI9 1066 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 SLC9A7Q96T83 725 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 UPF3BQ9BZI7 483 aaKnown RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 AP5M1Q9H0R1 490 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 FBXO28Q9NVF7 368 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 MUTYHQ9UIF7 546 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 DIS3Q9Y2L1 958 aaKnown RBP5.81□□□□□ -1.48
LIMS1-214ENST00000542845 WDFY4Q6ZS81 3184 aa5.81□□□□□ -1.48
LIMS1-214ENST00000542845 CHD7Q9P2D1 2997 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 H0Y858 1186 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 DYNC1LI2O43237 492 aaPredicted RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 SHMT1P34896 483 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 IRS1P35568 1242 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 ID4P47928 161 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 PLCD1P51178 756 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 TCF15Q12870 199 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 PUS10Q3MIT2 529 aaKnown RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 FAM47CQ5HY64 1035 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 TTC39AQ5SRH9 613 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 PADI6Q6TGC4 694 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 CLEC10AQ8IUN9 316 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 CPXCR1Q8N123 301 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 ZNF687Q8N1G0 1237 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 ANKRD35Q8N283 1001 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 RETREG2Q8NC44 543 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 VWCEQ96DN2 955 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 UPF3AQ9H1J1 476 aaKnown RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 SUGCTQ9HAC7 445 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 ARHGEF10LQ9HCE6 1279 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 TLR9Q9NR96 1032 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 TRMT13Q9NUP7 481 aaKnown RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 LMCD1Q9NZU5 365 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 FAM50BQ9Y247 325 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 CTDP1Q9Y5B0 961 aaPredicted RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.8□□□□□ -1.48
LIMS1-214ENST00000542845 PTPRSQ13332 1948 aa5.8□□□□□ -1.48
LIMS1-214ENST00000542845 GRIN2DO15399 1336 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 TMEM221A6NGB7 291 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 E9PSI1 815 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 RBAK-RBAKDNI3L0D1 243 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 M0R296 226 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 VWA5AO00534 786 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 CTAGE5O15320 804 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 ZEB2O60315 1214 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 IDH1O75874 414 aaKnown RBP5.79□□□□□ -1.48
LIMS1-214ENST00000542845 CABYRO75952 493 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 OATP04181 439 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 PFKMP08237 780 aa5.79□□□□□ -1.48
LIMS1-214ENST00000542845 UQCRFS1P1P0C7P4 283 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms