RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 HOMER2Q9NSB8 354 aa9.23□□□□□ -0.93
MRPS35-205ENST00000542791 TCP11L1Q9NUJ3 509 aa9.23□□□□□ -0.93
MRPS35-205ENST00000542791 FAM184BQ9ULE4 1060 aa9.23□□□□□ -0.93
MRPS35-205ENST00000542791 PRR12Q9ULL5 1215 aa9.23□□□□□ -0.93
MRPS35-205ENST00000542791 A0A1W2PQ45 241 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 A0A1W2PQY0 241 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 TRIM43BA6NCK2 446 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ADCY6O43306 1168 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 DUSP11O75319 330 aaKnown RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 SDSP20132 328 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 CST5P28325 142 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 CNTN2Q02246 1040 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 IKQ13123 557 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ACVR2BQ13705 512 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 BTNL9Q6UXG8 535 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ARMCX2Q7L311 632 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 KLHDC9Q8NEP7 349 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 RILPL2Q969X0 211 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 TRIM43Q96BQ3 446 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 LBHD1Q9BQE6 289 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 TMEM47Q9BQJ4 181 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 PRKAG2Q9UGJ0 569 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ZHX1Q9UKY1 873 aaPredicted RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ISY1Q9ULR0 285 aaKnown RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ZNFX1Q9P2E3 1918 aaKnown RBP9.22□□□□□ -0.93
MRPS35-205ENST00000542791 MYH4Q9Y623 1939 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 ASTN1O14525 1302 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 SYNRGQ9UMZ2 1314 aa9.22□□□□□ -0.93
MRPS35-205ENST00000542791 MOXD2PA6NHM9 499 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 ICAM1P05362 532 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 SNHG28P0DPA3 235 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TOP1P11387 765 aaKnown RBP9.21□□□□□ -0.94
MRPS35-205ENST00000542791 NT5C2P49902 561 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 ACLYP53396 1101 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 MFAP1P55081 439 aaKnown RBP9.21□□□□□ -0.94
MRPS35-205ENST00000542791 HAND2P61296 217 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 NKX3-2P78367 333 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TLE2Q04725 743 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 CCDC144BQ3MJ40 725 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 AKNAD1Q5T1N1 836 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 ANKRD33Q7Z3H0 272 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 SH3RF1Q7Z6J0 888 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TBC1D10CQ8IV04 446 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TOX2Q96NM4 488 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 UPF3AQ9H1J1 476 aaKnown RBP9.21□□□□□ -0.94
MRPS35-205ENST00000542791 RANBP17Q9H2T7 1088 aaKnown RBP9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TOMM22Q9NS69 142 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 CYP39A1Q9NYL5 469 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 TRANK1O15050 2925 aa9.21□□□□□ -0.94
MRPS35-205ENST00000542791 MYADML2A6NDP7 307 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 SOWAHBA6NEL2 793 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 KIAA0355O15063 1070 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 CTAGE5O15320 804 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 CLTBP09497 229 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 PDHBP11177 359 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 ALAS1P13196 640 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 GJA9P57773 515 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 SNAP25P60880 206 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 KCNA10Q16322 511 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 CCDC96Q2M329 555 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 MUM1L1Q5H9M0 696 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 RRP12Q5JTH9 1297 aaKnown RBP9.2□□□□□ -0.94
MRPS35-205ENST00000542791 SYDE2Q5VT97 1194 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 TTBK2Q6IQ55 1244 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 CCDC174Q6PII3 467 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 MFSD6Q6ZSS7 791 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 DEFB123Q8N688 67 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 TTC14Q96N46 770 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 RNF41Q9H4P4 317 aaPredicted RBP9.2□□□□□ -0.94
MRPS35-205ENST00000542791 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
MRPS35-205ENST00000542791 NEDD4P46934 1319 aa9.2□□□□□ -0.94
MRPS35-205ENST00000542791 PLXNA1Q9UIW2 1896 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 ASB14A6NK59 587 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 HIP1O00291 1037 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 PQBP1O60828 265 aaKnown RBP9.19□□□□□ -0.94
MRPS35-205ENST00000542791 ITGB8P26012 769 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 SLC16A2P36021 539 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 ZNF543Q08ER8 600 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 CWC27Q6UX04 472 aaKnown RBP9.19□□□□□ -0.94
MRPS35-205ENST00000542791 Q7L0L9 218 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 DGKHQ86XP1 1220 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 NUP133Q8WUM0 1156 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 ESR2Q92731 530 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 BADQ92934 168 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 SPC25Q9HBM1 224 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 STARD7Q9NQZ5 370 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 CCPG1Q9ULG6 757 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 MTMR7Q9Y216 660 aa9.19□□□□□ -0.94
MRPS35-205ENST00000542791 GNEQ9Y223 722 aaKnown RBP9.19□□□□□ -0.94
MRPS35-205ENST00000542791 BDP1A6H8Y1 2624 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms