RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ZYXQ15942 572 aaKnown RBP19.58■□□□□ 0.72
TMEM50B-210ENST00000542230 CDC37Q16543 378 aaPredicted RBP19.58■□□□□ 0.72
TMEM50B-210ENST00000542230 PDXDC2PQ6P474 469 aa19.58■□□□□ 0.72
TMEM50B-210ENST00000542230 SPATA20Q8TB22 786 aa19.58■□□□□ 0.72
TMEM50B-210ENST00000542230 DCAF4Q8WV16 495 aa19.58■□□□□ 0.72
TMEM50B-210ENST00000542230 HERC5Q9UII4 1024 aaKnown RBP19.58■□□□□ 0.72
TMEM50B-210ENST00000542230 MORC3Q14149 939 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 SARM1Q6SZW1 724 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 CCDC186Q7Z3E2 898 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 ELOA2Q8IYF1 753 aaPredicted RBP19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 P2RX7Q99572 595 aaKnown RBP19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 RIC8AQ9NPQ8 531 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 IKQ13123 557 aaPredicted RBP19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 ARID5BQ14865 1188 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 PTPN21Q16825 1174 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 TRMT44Q8IYL2 757 aaKnown RBP19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 MTMR14Q8NCE2 650 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 PCDHA1Q9Y5I3 950 aa19.57■□□□□ 0.72
TMEM50B-210ENST00000542230 NEMFO60524 1076 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 LONP1P36776 959 aaKnown RBP19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 DPYDQ12882 1025 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 LRMPQ12912 555 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 CUL4BQ13620 913 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 NAALADL2Q58DX5 795 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 GMCL1P1Q8NEA9 526 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 PSTPIP2Q9H939 334 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 ZBTB21Q9ULJ3 1066 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 COL2A1P02458 1487 aaPredicted RBP19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 TECP42680 631 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 USH1GQ495M9 461 aa19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 TBC1D10BQ4KMP7 808 aaPredicted RBP19.56■□□□□ 0.72
TMEM50B-210ENST00000542230 COBLO75128 1261 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 CD44P16070 742 aaKnown RBP19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 CLK2P49760 499 aaKnown RBP19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 GMPSP49915 693 aaPredicted RBP19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 RASA3Q14644 834 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 FANCLQ9NW38 375 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 HOOK1Q9UJC3 728 aaKnown RBP19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 hCG_1984214I3L0E3 225 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 OR52Z1P0C646 297 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 BMP3P12645 472 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 FAM177A1Q8N128 213 aaPredicted RBP19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 ZNF713Q8N859 430 aaPredicted RBP19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 IQUBQ8NA54 791 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 GMCL1Q96IK5 515 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 PYCARDQ9ULZ3 195 aa19.55■□□□□ 0.72
TMEM50B-210ENST00000542230 TXKP42681 527 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 PPP4R3BQ5MIZ7 849 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 KANK3Q6NY19 840 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 DPF2Q92785 391 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 IFNKQ9P0W0 207 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 UPF1Q92900 1129 aaKnown RBP eCLIP19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 CUL5Q93034 780 aa19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 XPO4Q9C0E2 1151 aaKnown RBP19.54■□□□□ 0.72
TMEM50B-210ENST00000542230 MYO1BO43795 1136 aa19.53■□□□□ 0.72
TMEM50B-210ENST00000542230 DGKZQ13574 1117 aa19.53■□□□□ 0.72
TMEM50B-210ENST00000542230 FAM83BQ5T0W9 1011 aa19.53■□□□□ 0.72
TMEM50B-210ENST00000542230 SYDE2Q5VT97 1194 aa19.53■□□□□ 0.72
TMEM50B-210ENST00000542230 DISC1Q9NRI5 854 aa19.53■□□□□ 0.72
TMEM50B-210ENST00000542230 ZNF541Q9H0D2 1346 aa19.53■□□□□ 0.72
TMEM50B-210ENST00000542230 MYL5Q02045 173 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 FKBP1CQ5VVH2 108 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 FAM83AQ86UY5 434 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 MRFAP1L1Q96HT8 127 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 TEPSINQ96N21 525 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 MTMR9Q96QG7 549 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 MYH7BA7E2Y1 1941 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 IKBKBO14920 756 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 SMC2O95347 1197 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 CAP2P40123 477 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 UBA7P41226 1012 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 STAT6P42226 847 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 TNIP1Q15025 636 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 PRAMEF18Q5VWM3 479 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 KLHL10Q6JEL2 608 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 RASSF8Q8NHQ8 419 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 MMTAG2Q9BU76 263 aaKnown RBP19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 PRR12Q9ULL5 1215 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 FZD1Q9UP38 647 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 TMX2Q9Y320 296 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 ARFGEF1Q9Y6D6 1849 aa19.52■□□□□ 0.72
TMEM50B-210ENST00000542230 MEIS2O14770 477 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 STX17P56962 302 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 ZNF280AP59817 542 aaPredicted RBP19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 PPP1R18Q6NYC8 613 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 FILIP1Q7Z7B0 1213 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 CNOT7Q9UIV1 285 aaKnown RBP19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 SMTNL1A8MU46 457 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 OPLAHO14841 1288 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 PRPHP41219 470 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 MRPL12P52815 198 aaKnown RBP19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 FBXO28Q9NVF7 368 aa19.51■□□□□ 0.71
TMEM50B-210ENST00000542230 POTEMA6NI47 508 aa19.5■□□□□ 0.71
TMEM50B-210ENST00000542230 ZNF500O60304 480 aaPredicted RBP19.5■□□□□ 0.71
TMEM50B-210ENST00000542230 FANCCQ00597 558 aa19.5■□□□□ 0.71
TMEM50B-210ENST00000542230 CALCRLQ16602 461 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms