RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 QRICH1Q2TAL8 776 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 TKFCQ3LXA3 575 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 MAMDC4Q6UXC1 1216 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 RAB11FIP4Q86YS3 637 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
YBX3-212ENST00000542002 MTMR8Q96EF0 704 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 SLC5A4Q9NY91 659 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 CYP39A1Q9NYL5 469 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 ZNF865P0CJ78 1059 aaPredicted RBP11.35□□□□□ -0.59
YBX3-212ENST00000542002 RXRAP19793 462 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 CNGA1P29973 690 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 SART3Q15020 963 aaKnown RBP11.35□□□□□ -0.59
YBX3-212ENST00000542002 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
YBX3-212ENST00000542002 USH1GQ495M9 461 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
YBX3-212ENST00000542002 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
YBX3-212ENST00000542002 NUP133Q8WUM0 1156 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 TMEM87BQ96K49 555 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 KATNBL1Q9H079 304 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
YBX3-212ENST00000542002 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 OPLAHO14841 1288 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 REC8O95072 547 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 PLEKHA8P1O95397 391 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 SEC24BO95487 1268 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 NSMFQ6X4W1 530 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
YBX3-212ENST00000542002 SGMS1Q86VZ5 419 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 CCDC144CPQ8IYA2 1237 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
YBX3-212ENST00000542002 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
YBX3-212ENST00000542002 PIGSQ96S52 555 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
YBX3-212ENST00000542002 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
YBX3-212ENST00000542002 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.59
YBX3-212ENST00000542002 ZNF236Q9UL36 1845 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 CCDC69A6NI79 296 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 SEPT4O43236 478 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 ADCY6O43306 1168 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 PTGS1P23219 599 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 RPS6P62753 249 aaKnown RBP11.33□□□□□ -0.6
YBX3-212ENST00000542002 TMEM63BQ5T3F8 832 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 NFXL1Q6ZNB6 911 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 MSL3Q8N5Y2 521 aaKnown RBP11.33□□□□□ -0.6
YBX3-212ENST00000542002 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
YBX3-212ENST00000542002 PIBF1Q8WXW3 757 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 LENG1Q96BZ8 264 aaPredicted RBP11.33□□□□□ -0.6
YBX3-212ENST00000542002 JAKMIP1Q96N16 626 aaKnown RBP11.33□□□□□ -0.6
YBX3-212ENST00000542002 MAP3K14Q99558 947 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
YBX3-212ENST00000542002 COL20A1Q9P218 1284 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 SMCHD1A6NHR9 2005 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
YBX3-212ENST00000542002 ZBTB5O15062 677 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 DHX16O60231 1041 aaKnown RBP11.32□□□□□ -0.6
YBX3-212ENST00000542002 DDAH1O94760 285 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
YBX3-212ENST00000542002 CALML3P27482 149 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
YBX3-212ENST00000542002 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 KRT32Q14532 448 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 ARMCX2Q7L311 632 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 FBXO11Q86XK2 927 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 FANCBQ8NB91 859 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
YBX3-212ENST00000542002 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 PFASO15067 1338 aa11.32□□□□□ -0.6
YBX3-212ENST00000542002 RBBP6Q7Z6E9 1792 aaKnown RBP11.31□□□□□ -0.6
YBX3-212ENST00000542002 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.31□□□□□ -0.6
YBX3-212ENST00000542002 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 EPB41L2O43491 1005 aaKnown RBP11.31□□□□□ -0.6
YBX3-212ENST00000542002 COL6A1P12109 1028 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 FUT2Q10981 343 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
YBX3-212ENST00000542002 TAPT1Q6NXT6 567 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 Q6ZUG5 572 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 HOMER1Q86YM7 354 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
YBX3-212ENST00000542002 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 TAAR1Q96RJ0 339 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
YBX3-212ENST00000542002 PDGFCQ9NRA1 345 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms