RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CRIM1Q9NZV1 1036 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 ADAM30Q9UKF2 790 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 PPP1R9AQ9ULJ8 1098 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 PALLDQ8WX93 1383 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 GAS2O43903 313 aaKnown RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 U2AF1L5P0DN76 240 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 ADH5P11766 374 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 GLB1P16278 677 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 ASPAP45381 313 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 YARSP54577 528 aaKnown RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 U2AF1Q01081 240 aaKnown RBP eCLIP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 PPP2R5EQ16537 467 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 MTHFSDQ2M296 383 aaKnown RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 PPM1JQ5JR12 505 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 ALYREFQ86V81 257 aaKnown RBP7.04□□□□□ -1.28
CPSF7-220ENST00000541963 HID1Q8IV36 788 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 FANCD2OSQ96PS1 177 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 MTFR1LQ9H019 292 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 ZSWIM4Q9H7M6 989 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 ATG3Q9NT62 314 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 GMIPQ9P107 970 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 CORINQ9Y5Q5 1042 aa7.04□□□□□ -1.28
CPSF7-220ENST00000541963 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 ZBTB7AO95365 584 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 POLD1P28340 1107 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 CCDC144BQ3MJ40 725 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 TMEM201Q5SNT2 666 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 ZBTB37Q5TC79 503 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 TMEM40Q8WWA1 233 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 TM9SF2Q99805 663 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 OSBPL2Q9H1P3 480 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 ACTR10Q9NZ32 417 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 SIRPGQ9P1W8 387 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 KLHL3Q9UH77 587 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 ASAP1Q9ULH1 1129 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 PCDHGC5Q9Y5F6 944 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 ITGB4P16144 1822 aa7.03□□□□□ -1.28
CPSF7-220ENST00000541963 LRP5O75197 1615 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 LY75O60449 1722 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 RNMTO43148 476 aaKnown RBP7.02□□□□□ -1.29
CPSF7-220ENST00000541963 DRD2P14416 443 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 PRKAR2BP31323 418 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 TEFQ10587 303 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 ZNF827Q17R98 1081 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 SHISA2Q6UWI4 295 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 NOP9Q86U38 636 aaKnown RBP7.02□□□□□ -1.29
CPSF7-220ENST00000541963 LSRQ86X29 649 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-220ENST00000541963 AGGF1Q8N302 714 aaeCLIP7.02□□□□□ -1.29
CPSF7-220ENST00000541963 FAM13CQ8NE31 585 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 RTF1Q92541 710 aaKnown RBP7.02□□□□□ -1.29
CPSF7-220ENST00000541963 SLC52A2Q9HAB3 445 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 SLC12A7Q9Y666 1083 aa7.02□□□□□ -1.29
CPSF7-220ENST00000541963 HTATSF1O43719 755 aaKnown RBP7.01□□□□□ -1.29
CPSF7-220ENST00000541963 ALX3O95076 343 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 RAG1P15918 1043 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 SELPP16109 830 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 RING1Q06587 406 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 RAB33AQ14088 237 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 TTLL4Q14679 1199 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 FXNQ16595 210 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
CPSF7-220ENST00000541963 SMYD4Q8IYR2 804 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-220ENST00000541963 TTC5Q8N0Z6 440 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 C19orf47Q8N9M1 422 aaKnown RBP7.01□□□□□ -1.29
CPSF7-220ENST00000541963 HNRNPLLQ8WVV9 542 aaKnown RBP7.01□□□□□ -1.29
CPSF7-220ENST00000541963 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 LGR6Q9HBX8 967 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 PCOLCE2Q9UKZ9 415 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 PNPLA7Q6ZV29 1317 aa7.01□□□□□ -1.29
CPSF7-220ENST00000541963 COL3A1P02461 1466 aaPredicted RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 SLC22A31A6NKX4 558 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 MEIS3P2A8K0S8 358 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 TIAF1O95411 115 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 HCLS1P14317 486 aaPredicted RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 GUCY2CP25092 1073 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 INTS3Q68E01 1043 aaKnown RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 MCATQ8IVS2 390 aaKnown RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 PHACTR4Q8IZ21 702 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 TMEM87BQ96K49 555 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 PDGFDQ9GZP0 370 aaPredicted RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 TOGARAM1Q9Y4F4 1720 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 KDM6AO15550 1401 aaPredicted RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 MYBBP1AQ9BQG0 1328 aaKnown RBP7□□□□□ -1.29
CPSF7-220ENST00000541963 MAPK8IP3Q9UPT6 1336 aa7□□□□□ -1.29
CPSF7-220ENST00000541963 MAP3K5Q99683 1374 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 PAPPAQ13219 1627 aa6.99□□□□□ -1.29
CPSF7-220ENST00000541963 K7ELQ4 463 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-220ENST00000541963 RNF225M0QZC1 329 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms