RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 ACLYP53396 1101 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 KCNA10Q16322 511 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 C9orf50Q5SZB4 431 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.52■□□□□ 0.24
SUDS3-203ENST00000541591 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.24
SUDS3-203ENST00000541591 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 COL6A3P12111 3177 aa16.51■□□□□ 0.23
SUDS3-203ENST00000541591 ZNF213O14771 459 aa16.51■□□□□ 0.23
SUDS3-203ENST00000541591 KDM4AO75164 1064 aa16.51■□□□□ 0.23
SUDS3-203ENST00000541591 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
SUDS3-203ENST00000541591 SLC30A10Q6XR72 485 aa16.51■□□□□ 0.23
SUDS3-203ENST00000541591 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
SUDS3-203ENST00000541591 ZNF467Q7Z7K2 595 aaPredicted RBP16.51■□□□□ 0.23
SUDS3-203ENST00000541591 STARD7Q9NQZ5 370 aa16.51■□□□□ 0.23
SUDS3-203ENST00000541591 PLA2G6O60733 806 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 ICAM1P05362 532 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 FDX1P10109 184 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 MFAP1P55081 439 aaKnown RBP16.5■□□□□ 0.23
SUDS3-203ENST00000541591 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
SUDS3-203ENST00000541591 MSL3Q8N5Y2 521 aaKnown RBP16.5■□□□□ 0.23
SUDS3-203ENST00000541591 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 FAM161BQ96MY7 647 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 TCP11L1Q9NUJ3 509 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
SUDS3-203ENST00000541591 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 DUSP11O75319 330 aaKnown RBP16.49■□□□□ 0.23
SUDS3-203ENST00000541591 ASGR1P07306 291 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 CLTBP09497 229 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 CALML3P27482 149 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 ZNF543Q08ER8 600 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 SHHQ15465 462 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 TKFCQ3LXA3 575 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 USH1GQ495M9 461 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 DEFB123Q8N688 67 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 ESR2Q92731 530 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 VTI1AQ96AJ9 217 aa16.49■□□□□ 0.23
SUDS3-203ENST00000541591 CTAGE5O15320 804 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 EPHB4P54760 987 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 TNFAIP2Q03169 654 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 LRIT3Q3SXY7 679 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 GNASQ5JWF2 1037 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 CCSAPQ6IQ19 270 aaPredicted RBP16.48■□□□□ 0.23
SUDS3-203ENST00000541591 BTNL9Q6UXG8 535 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 RNF41Q9H4P4 317 aaPredicted RBP16.48■□□□□ 0.23
SUDS3-203ENST00000541591 TANC1Q9C0D5 1861 aa16.48■□□□□ 0.23
SUDS3-203ENST00000541591 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 SMPD1P17405 629 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 GJA9P57773 515 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 PPP1R13LQ8WUF5 828 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
SUDS3-203ENST00000541591 TMEM39AQ9NV64 488 aa16.47■□□□□ 0.23
SUDS3-203ENST00000541591 TNKSO95271 1327 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 ASB14A6NK59 587 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 HIP1O00291 1037 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.23
SUDS3-203ENST00000541591 FAAP100Q0VG06 881 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 IMMTQ16891 758 aaKnown RBP16.46■□□□□ 0.23
SUDS3-203ENST00000541591 TAPT1Q6NXT6 567 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 TLK2Q86UE8 772 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
SUDS3-203ENST00000541591 CLEC4DQ8WXI8 215 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 TSEN34Q9BSV6 310 aaKnown RBP16.46■□□□□ 0.23
SUDS3-203ENST00000541591 DSCC1Q9BVC3 393 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
SUDS3-203ENST00000541591 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 DYNC1LI2O43237 492 aaPredicted RBP16.45■□□□□ 0.22
SUDS3-203ENST00000541591 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 RAG1P15918 1043 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 PSMC6P62333 389 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 PTH1RQ03431 593 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 C1orf53Q5VUE5 145 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 CXCL17Q6UXB2 119 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 NUP133Q8WUM0 1156 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 GLT1D1Q96MS3 346 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
SUDS3-203ENST00000541591 PPP1R12CQ9BZL4 782 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
SUDS3-203ENST00000541591 RBAK-RBAKDNI3L0D1 243 aa16.44■□□□□ 0.22
SUDS3-203ENST00000541591 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
SUDS3-203ENST00000541591 CST5P28325 142 aaPredicted RBP16.44■□□□□ 0.22
SUDS3-203ENST00000541591 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
SUDS3-203ENST00000541591 RNF207Q6ZRF8 634 aa16.44■□□□□ 0.22
SUDS3-203ENST00000541591 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
SUDS3-203ENST00000541591 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
SUDS3-203ENST00000541591 TTC14Q96N46 770 aa16.44■□□□□ 0.22
SUDS3-203ENST00000541591 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
SUDS3-203ENST00000541591 DCDC2CA8MYV0 355 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms