RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 CCDC178Q5BJE1 867 aa23.51■■□□□ 1.35
ATN1-204ENST00000541029 PURBQ96QR8 312 aaKnown RBP23.51■■□□□ 1.35
ATN1-204ENST00000541029 KRT23Q9C075 422 aa23.51■■□□□ 1.35
ATN1-204ENST00000541029 CPVLQ9H3G5 476 aa23.51■■□□□ 1.35
ATN1-204ENST00000541029 ZSWIM5Q9P217 1185 aa23.51■■□□□ 1.35
ATN1-204ENST00000541029 A0A1W2PQ45 241 aaPredicted RBP23.5■■□□□ 1.35
ATN1-204ENST00000541029 A0A1W2PQY0 241 aa23.5■■□□□ 1.35
ATN1-204ENST00000541029 SOX1O00570 391 aaPredicted RBP23.5■■□□□ 1.35
ATN1-204ENST00000541029 NFIBO00712 420 aa23.5■■□□□ 1.35
ATN1-204ENST00000541029 DUSP11O75319 330 aaKnown RBP23.5■■□□□ 1.35
ATN1-204ENST00000541029 RUFY2Q8WXA3 655 aa23.5■■□□□ 1.35
ATN1-204ENST00000541029 UBE2OQ9C0C9 1292 aaKnown RBP23.5■■□□□ 1.35
ATN1-204ENST00000541029 KAT14Q9H8E8 782 aa23.5■■□□□ 1.35
ATN1-204ENST00000541029 CNNM2Q9H8M5 875 aa23.5■■□□□ 1.35
ATN1-204ENST00000541029 IRX5P78411 483 aaPredicted RBP23.49■■□□□ 1.35
ATN1-204ENST00000541029 PTH1RQ03431 593 aa23.49■■□□□ 1.35
ATN1-204ENST00000541029 GPATCH4Q5T3I0 446 aaKnown RBP23.49■■□□□ 1.35
ATN1-204ENST00000541029 ANKS1AQ92625 1134 aa23.49■■□□□ 1.35
ATN1-204ENST00000541029 ASB14A6NK59 587 aa23.48■■□□□ 1.35
ATN1-204ENST00000541029 SLC30A10Q6XR72 485 aa23.48■■□□□ 1.35
ATN1-204ENST00000541029 KLHDC9Q8NEP7 349 aa23.48■■□□□ 1.35
ATN1-204ENST00000541029 UBAC1Q9BSL1 405 aa23.48■■□□□ 1.35
ATN1-204ENST00000541029 PRDM5Q9NQX1 630 aaPredicted RBP23.48■■□□□ 1.35
ATN1-204ENST00000541029 PRKAG2Q9UGJ0 569 aa23.48■■□□□ 1.35
ATN1-204ENST00000541029 WDR19Q8NEZ3 1342 aa23.48■■□□□ 1.35
ATN1-204ENST00000541029 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.47■■□□□ 1.35
ATN1-204ENST00000541029 C6orf222P0C671 652 aaPredicted RBP23.47■■□□□ 1.35
ATN1-204ENST00000541029 ACLYP53396 1101 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 BAATQ14032 418 aaPredicted RBP23.47■■□□□ 1.35
ATN1-204ENST00000541029 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 CYB5R4Q7L1T6 521 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 FBXO16Q8IX29 292 aaPredicted RBP23.47■■□□□ 1.35
ATN1-204ENST00000541029 TDHQ8IZJ6 230 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 CLEC4DQ8WXI8 215 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 TSEN34Q9BSV6 310 aaKnown RBP23.47■■□□□ 1.35
ATN1-204ENST00000541029 UBA5Q9GZZ9 404 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 UPF3AQ9H1J1 476 aaKnown RBP23.47■■□□□ 1.35
ATN1-204ENST00000541029 PDLIM7Q9NR12 457 aa23.47■■□□□ 1.35
ATN1-204ENST00000541029 LAMA2P24043 3122 aaKnown RBP23.46■■□□□ 1.35
ATN1-204ENST00000541029 PTPDC1A2A3K4 754 aa23.46■■□□□ 1.35
ATN1-204ENST00000541029 SGSM2O43147 1006 aa23.46■■□□□ 1.35
ATN1-204ENST00000541029 CYP21A2P08686 494 aa23.46■■□□□ 1.35
ATN1-204ENST00000541029 CST5P28325 142 aaPredicted RBP23.46■■□□□ 1.35
ATN1-204ENST00000541029 CCSAPQ6IQ19 270 aaPredicted RBP23.46■■□□□ 1.35
ATN1-204ENST00000541029 EEPD1Q7L9B9 569 aa23.46■■□□□ 1.35
ATN1-204ENST00000541029 LRCH3Q96II8 777 aa23.46■■□□□ 1.35
ATN1-204ENST00000541029 MOXD2PA6NHM9 499 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 GJA9P57773 515 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 TLE2Q04725 743 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 KCNA10Q16322 511 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 CDC37Q16543 378 aaPredicted RBP23.45■■□□□ 1.34
ATN1-204ENST00000541029 USH1GQ495M9 461 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 ASPRV1Q53RT3 343 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 IFIT1BQ5T764 474 aaKnown RBP23.45■■□□□ 1.34
ATN1-204ENST00000541029 LBHD1Q9BQE6 289 aaPredicted RBP23.45■■□□□ 1.34
ATN1-204ENST00000541029 STARD7Q9NQZ5 370 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 PNMA2Q9UL42 364 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 TAF6LQ9Y6J9 622 aa23.45■■□□□ 1.34
ATN1-204ENST00000541029 PQBP1O60828 265 aaKnown RBP23.44■■□□□ 1.34
ATN1-204ENST00000541029 PTGS1P23219 599 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 CALML3P27482 149 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 ALDH5A1P51649 535 aaPredicted RBP23.44■■□□□ 1.34
ATN1-204ENST00000541029 TNFAIP2Q03169 654 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 SEC23AQ15436 765 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 RNF207Q6ZRF8 634 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 SH3RF1Q7Z6J0 888 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 SPC25Q9HBM1 224 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 PDGFCQ9NRA1 345 aa23.44■■□□□ 1.34
ATN1-204ENST00000541029 U3KPZ7 1027 aaPredicted RBP23.44■■□□□ 1.34
ATN1-204ENST00000541029 BAZ2BQ9UIF8 2168 aaKnown RBP23.44■■□□□ 1.34
ATN1-204ENST00000541029 PARP1P09874 1014 aaKnown RBP23.43■■□□□ 1.34
ATN1-204ENST00000541029 NOL8Q76FK4 1167 aaKnown RBP23.43■■□□□ 1.34
ATN1-204ENST00000541029 TLK2Q86UE8 772 aa23.43■■□□□ 1.34
ATN1-204ENST00000541029 SKAP1Q86WV1 359 aa23.43■■□□□ 1.34
ATN1-204ENST00000541029 ADGRF4Q8IZF3 695 aa23.43■■□□□ 1.34
ATN1-204ENST00000541029 MORC4Q8TE76 937 aa23.43■■□□□ 1.34
ATN1-204ENST00000541029 ADD3Q9UEY8 706 aaKnown RBP23.43■■□□□ 1.34
ATN1-204ENST00000541029 KIAA1217Q5T5P2 1943 aa23.43■■□□□ 1.34
ATN1-204ENST00000541029 TRIM43BA6NCK2 446 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 CTAGE5O15320 804 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 ASGR1P07306 291 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 RPS6P62753 249 aaKnown RBP23.42■■□□□ 1.34
ATN1-204ENST00000541029 TRDNQ13061 729 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 TAPT1Q6NXT6 567 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 PCSK9Q8NBP7 692 aaKnown RBP23.42■■□□□ 1.34
ATN1-204ENST00000541029 NUP133Q8WUM0 1156 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 TRIM43Q96BQ3 446 aaPredicted RBP23.42■■□□□ 1.34
ATN1-204ENST00000541029 VTA1Q9NP79 307 aa23.42■■□□□ 1.34
ATN1-204ENST00000541029 GNEQ9Y223 722 aaKnown RBP23.42■■□□□ 1.34
ATN1-204ENST00000541029 DHX16O60231 1041 aaKnown RBP23.41■■□□□ 1.34
ATN1-204ENST00000541029 CLTBP09497 229 aa23.41■■□□□ 1.34
ATN1-204ENST00000541029 SMPD1P17405 629 aa23.41■■□□□ 1.34
ATN1-204ENST00000541029 BEX3Q00994 111 aa23.41■■□□□ 1.34
ATN1-204ENST00000541029 GNASQ5JWF2 1037 aa23.41■■□□□ 1.34
ATN1-204ENST00000541029 STOX1Q6ZVD7 989 aa23.41■■□□□ 1.34
ATN1-204ENST00000541029 GLT1D1Q96MS3 346 aa23.41■■□□□ 1.34
ATN1-204ENST00000541029 E7EWF7 191 aa23.4■■□□□ 1.34
ATN1-204ENST00000541029 QRICH1Q2TAL8 776 aa23.4■■□□□ 1.34
ATN1-204ENST00000541029 LRIT3Q3SXY7 679 aa23.4■■□□□ 1.34
ATN1-204ENST00000541029 TMEM63BQ5T3F8 832 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms