RNA–Protein interactions for RNA: ENST00000540838.1

KDM5A-207, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-207ENST00000540838 RBM17Q96I25 401 aaKnown RBP7.23□□□□□ -1.25
KDM5A-207ENST00000540838 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
KDM5A-207ENST00000540838 VPS33BQ9H267 617 aa7.23□□□□□ -1.25
KDM5A-207ENST00000540838 GINM1Q9NU53 330 aa7.23□□□□□ -1.25
KDM5A-207ENST00000540838 MIS18AQ9NYP9 233 aa7.23□□□□□ -1.25
KDM5A-207ENST00000540838 EFR3BQ9Y2G0 817 aa7.23□□□□□ -1.25
KDM5A-207ENST00000540838 RRP7AQ9Y3A4 280 aaKnown RBP7.23□□□□□ -1.25
KDM5A-207ENST00000540838 MAP3K15Q6ZN16 1313 aa7.23□□□□□ -1.25
KDM5A-207ENST00000540838 COL11A2P13942 1736 aaPredicted RBP7.22□□□□□ -1.25
KDM5A-207ENST00000540838 RASSF10A6NK89 507 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 SMNDC1O75940 238 aaKnown RBP eCLIP7.22□□□□□ -1.25
KDM5A-207ENST00000540838 SSBP05455 408 aaKnown RBP eCLIP7.22□□□□□ -1.25
KDM5A-207ENST00000540838 CELA3AP09093 270 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 ACPPP15309 386 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 ITPKAP23677 461 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 CDC25BP30305 580 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 EIF4A1P60842 406 aaKnown RBP7.22□□□□□ -1.25
KDM5A-207ENST00000540838 MAP2K1Q02750 393 aaPredicted RBP7.22□□□□□ -1.25
KDM5A-207ENST00000540838 NFE2L2Q16236 605 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 DEFB115Q30KQ5 88 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 PPP1R42Q7Z4L9 355 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 NGEFQ8N5V2 710 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 RPGRQ92834 1020 aaKnown RBP7.22□□□□□ -1.25
KDM5A-207ENST00000540838 CRAMP1Q96RY5 1269 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 RASSF4Q9H2L5 321 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 ZNF541Q9H0D2 1346 aa7.22□□□□□ -1.25
KDM5A-207ENST00000540838 IBTKQ9P2D0 1353 aaPredicted RBP7.21□□□□□ -1.25
KDM5A-207ENST00000540838 BCORQ6W2J9 1755 aa7.21□□□□□ -1.25
KDM5A-207ENST00000540838 ARFGEF2Q9Y6D5 1785 aa7.21□□□□□ -1.25
KDM5A-207ENST00000540838 MINDY4BA8MYZ0 360 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 ENC1O14682 589 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 FOXN1O15353 648 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 KLF4O43474 513 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 COL9A2Q14055 689 aaPredicted RBP7.21□□□□□ -1.26
KDM5A-207ENST00000540838 PARP10Q53GL7 1025 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 OLFM4Q6UX06 510 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 USP50Q70EL3 339 aaPredicted RBP7.21□□□□□ -1.26
KDM5A-207ENST00000540838 ANKRD13AQ8IZ07 590 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 ZNF34Q8IZ26 560 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 MKL1Q969V6 931 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 PLEKHF1Q96S99 279 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 BHLHE41Q9C0J9 482 aaPredicted RBP7.21□□□□□ -1.26
KDM5A-207ENST00000540838 BABAM1Q9NWV8 329 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 TLR6Q9Y2C9 796 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 AKAP2Q9Y2D5 859 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 PPME1Q9Y570 386 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 SUPT16HQ9Y5B9 1047 aaKnown RBP7.21□□□□□ -1.26
KDM5A-207ENST00000540838 RNF123Q5XPI4 1314 aa7.21□□□□□ -1.26
KDM5A-207ENST00000540838 RIC1Q4ADV7 1423 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 LINC01387J3KSC0 135 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 DLL1O00548 723 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 BBOX1O75936 387 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 MYL6BP14649 208 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 NOS3P29474 1203 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 ETFBP38117 255 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 GRIA4P48058 902 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 LMNB2Q03252 620 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 TCEAL1Q15170 157 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 MAP3K11Q16584 847 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 SLC10A5Q5PT55 438 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 SUSD4Q5VX71 490 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 MAP1SQ66K74 1059 aaPredicted RBP7.2□□□□□ -1.26
KDM5A-207ENST00000540838 TXNDC11Q6PKC3 985 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 TTLL7Q6ZT98 887 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 CEP120Q8N960 986 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 SUPT20HQ8NEM7 779 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 OSMRQ99650 979 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 CEP44Q9C0F1 390 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 ZFYVE1Q9HBF4 777 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 DDX21Q9NR30 783 aaKnown RBP eCLIP7.2□□□□□ -1.26
KDM5A-207ENST00000540838 DZANK1Q9NVP4 752 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 MRPL42Q9Y6G3 142 aaKnown RBP7.2□□□□□ -1.26
KDM5A-207ENST00000540838 WDR33Q9C0J8 1336 aaKnown RBP7.2□□□□□ -1.26
KDM5A-207ENST00000540838 MAPK8IP3Q9UPT6 1336 aa7.2□□□□□ -1.26
KDM5A-207ENST00000540838 ALX3O95076 343 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 PF4P02776 101 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 GPTP24298 496 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 CDC27P30260 824 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 ECE1P42892 770 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 FAM160A1Q05DH4 1040 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 RAB33AQ14088 237 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 SETDB1Q15047 1291 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 HSP90AB3PQ58FF7 597 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 PCNX4Q63HM2 1172 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 NIM1KQ8IY84 436 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 CACTIN-AS1Q8N1I8 211 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 NECAB3Q96P71 396 aaPredicted RBP7.19□□□□□ -1.26
KDM5A-207ENST00000540838 UTP14AQ9BVJ6 771 aaKnown RBP7.19□□□□□ -1.26
KDM5A-207ENST00000540838 MUC3BQ9H195 1237 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 UBP1Q9NZI7 540 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 ABT1Q9ULW3 272 aaKnown RBP7.19□□□□□ -1.26
KDM5A-207ENST00000540838 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.19□□□□□ -1.26
KDM5A-207ENST00000540838 ATP6V0A2Q9Y487 856 aa7.19□□□□□ -1.26
KDM5A-207ENST00000540838 SNED1Q8TER0 1413 aa7.18□□□□□ -1.26
KDM5A-207ENST00000540838 PPIP5K2O43314 1243 aa7.18□□□□□ -1.26
KDM5A-207ENST00000540838 NTSR2O95665 410 aa7.18□□□□□ -1.26
KDM5A-207ENST00000540838 TFE3P19532 575 aaPredicted RBP7.18□□□□□ -1.26
KDM5A-207ENST00000540838 EPS15P42566 896 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms