RNA–Protein interactions for RNA: ENST00000540665.5

TTC28-AS1-221, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-221ENST00000540665 LOC102724159A0A0B4J2E5 919 aa18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 KLRF2D3W0D1 207 aa18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 SH2B2O14492 632 aaPredicted RBP18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 DDAH1O94760 285 aa18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 LIFRP42702 1097 aa18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 PWP2Q15269 919 aaKnown RBP18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 STAG2Q8N3U4 1231 aa18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 MTMR8Q96EF0 704 aa18.85■□□□□ 0.61
TTC28-AS1-221ENST00000540665 NFIBO00712 420 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 SNAI1O95863 264 aaPredicted RBP18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 ZNF865P0CJ78 1059 aaPredicted RBP18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 AKR1A1P14550 325 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 CNTN2Q02246 1040 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 PRPF38BQ5VTL8 546 aaKnown RBP18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 NSMFQ6X4W1 530 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 CLEC4DQ8WXI8 215 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 KCNB2Q92953 911 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 PAWRQ96IZ0 340 aaKnown RBP18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 ABHD16BQ9H3Z7 469 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 JMJD4Q9H9V9 463 aa18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.84■□□□□ 0.61
TTC28-AS1-221ENST00000540665 SOWAHBA6NEL2 793 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ASB14A6NK59 587 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DHX16O60231 1041 aaKnown RBP18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 TAL1P17542 331 aaPredicted RBP18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 HSPA4P34932 840 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 QRICH1Q2TAL8 776 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ARMCX2Q7L311 632 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ZNF654Q8IZM8 581 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 RGS22Q8NE09 1264 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DIS3LQ8TF46 1054 aaKnown RBP18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 C11orf49Q9H6J7 331 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 RIOX1Q9H6W3 641 aa18.83■□□□□ 0.6
TTC28-AS1-221ENST00000540665 KIAA1217Q5T5P2 1943 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ASTN1O14525 1302 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DNM1LO00429 736 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 HMGB1P09429 215 aaKnown RBP18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 COL6A1P12109 1028 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 KIF5BP33176 963 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 COL9A3Q14050 684 aaPredicted RBP18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 USH1GQ495M9 461 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SGMS1Q86VZ5 419 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 FBXO11Q86XK2 927 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CCDC144CPQ8IYA2 1237 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DNAH12Q6ZR08 3092 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CCDC69A6NI79 296 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ZBTB5O15062 677 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CALM1P0DP23 149 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CALM2P0DP24 149 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CALM3P0DP25 149 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 RARBP10826 455 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SMARCA1P28370 1054 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 TRAF1Q13077 416 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ACVR2BQ13705 512 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 BAATQ14032 418 aaPredicted RBP18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SLC30A10Q6XR72 485 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 RNF207Q6ZRF8 634 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ARRDC4Q8NCT1 418 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CTCFLQ8NI51 663 aaPredicted RBP18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 MORC4Q8TE76 937 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 AMNQ9BXJ7 453 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 KATNBL1Q9H079 304 aa18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 BAZ2BQ9UIF8 2168 aaKnown RBP18.81■□□□□ 0.6
TTC28-AS1-221ENST00000540665 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ADCK5Q3MIX3 580 aa18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SPZ1Q9BXG8 430 aa18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 GPHNQ9NQX3 736 aaPredicted RBP18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ZHX1Q9UKY1 873 aaPredicted RBP18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 FAM184BQ9ULE4 1060 aa18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 MRPL11Q9Y3B7 192 aaKnown RBP18.8■□□□□ 0.6
TTC28-AS1-221ENST00000540665 CYTH3O43739 400 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 GNAQP50148 359 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ALDH5A1P51649 535 aaPredicted RBP18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 GHRHRQ02643 423 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SLC35G1Q2M3R5 365 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 MCF2L2Q86YR7 1114 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DNERQ8NFT8 737 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 NUP133Q8WUM0 1156 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 LZTS2Q9BRK4 669 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 XPNPEP3Q9NQH7 507 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SLC12A7Q9Y666 1083 aa18.79■□□□□ 0.6
TTC28-AS1-221ENST00000540665 ANO1Q5XXA6 986 aa18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SAMD3Q8N6K7 520 aa18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 MYL10Q9BUA6 226 aa18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 VTA1Q9NP79 307 aa18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 MAP3K20Q9NYL2 800 aaKnown RBP18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 SNX14Q9Y5W7 946 aa18.78■□□□□ 0.6
TTC28-AS1-221ENST00000540665 KBTBD13C9JR72 458 aa18.77■□□□□ 0.6
TTC28-AS1-221ENST00000540665 PPP1R11O60927 126 aaPredicted RBP18.77■□□□□ 0.6
TTC28-AS1-221ENST00000540665 DUSP11O75319 330 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms