RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PLTPP55058 493 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 KCTD21Q4G0X4 260 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
PBX1-212ENST00000540236 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 PAG1Q9NWQ8 432 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 CWF19L1Q69YN2 538 aaKnown RBP12.15□□□□□ -0.46
PBX1-212ENST00000540236 GRAMD4Q6IC98 578 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.46
PBX1-212ENST00000540236 CHMP6Q96FZ7 201 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 CENPKQ9BS16 269 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 FAM107AO95990 144 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 GFPT1Q06210 699 aaPredicted RBP12.15□□□□□ -0.46
PBX1-212ENST00000540236 TRIML1Q8N9V2 468 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 IKBKGQ9Y6K9 419 aa12.15□□□□□ -0.46
PBX1-212ENST00000540236 SPDYE3A6NKU9 549 aa12.15□□□□□ -0.47
PBX1-212ENST00000540236 ATP6V1G1O75348 118 aa12.15□□□□□ -0.47
PBX1-212ENST00000540236 ERVK-24P63145 666 aa12.15□□□□□ -0.47
PBX1-212ENST00000540236 GBP7Q8N8V2 638 aaPredicted RBP12.15□□□□□ -0.47
PBX1-212ENST00000540236 MAP4K1Q92918 833 aa12.15□□□□□ -0.47
PBX1-212ENST00000540236 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.47
PBX1-212ENST00000540236 PAIP2BQ9ULR5 123 aaKnown RBP12.15□□□□□ -0.47
PBX1-212ENST00000540236 PLXNC1O60486 1568 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 SLC8A3P57103 927 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 Q4G0T1 1027 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 TAB3Q8N5C8 712 aaPredicted RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 SYMPKQ92797 1274 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 ZMAT2Q96NC0 199 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 PANK4Q9NVE7 773 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 CYP21A2P08686 494 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 SERPINB3P29508 390 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 TRIM14Q14142 442 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 RPS6KA1Q15418 735 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 BPIFA3Q9BQP9 254 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 METTL5Q9NRN9 209 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 CCT8L1PA6NM43 557 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 STAMBPO95630 424 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 PPP4R3AQ6IN85 833 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 SIX5Q8N196 739 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 DDX50Q9BQ39 737 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 TAOK1Q7L7X3 1001 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 TSG101Q99816 390 aa12.14□□□□□ -0.47
PBX1-212ENST00000540236 STMN4Q9H169 189 aaPredicted RBP12.14□□□□□ -0.47
PBX1-212ENST00000540236 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 PSMA7O14818 248 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
PBX1-212ENST00000540236 P3H1Q32P28 736 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 NANOGNBQ7Z5D8 188 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 SIKE1Q9BRV8 207 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 TARSP26639 723 aaKnown RBP12.13□□□□□ -0.47
PBX1-212ENST00000540236 DIS3L2Q8IYB7 885 aaKnown RBP12.13□□□□□ -0.47
PBX1-212ENST00000540236 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 KLHL33A6NCF5 533 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 KCNJ2P63252 427 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 SHC4Q6S5L8 630 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 MFN1Q8IWA4 741 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 NAF1Q96HR8 494 aaKnown RBP12.13□□□□□ -0.47
PBX1-212ENST00000540236 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 NAPBQ9H115 298 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 PLB1Q6P1J6 1458 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 BTBD18B2RXH4 712 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 EIF4A3P38919 411 aaKnown RBP12.13□□□□□ -0.47
PBX1-212ENST00000540236 SPAG1Q07617 926 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 KLC1Q07866 573 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 MTMR3Q13615 1198 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 LRRC34Q8IZ02 419 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 USP44Q9H0E7 712 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 MRGBPQ9NV56 204 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 PALMO75781 387 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 YY1P25490 414 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 SERPINB6P35237 376 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 PSMD6Q15008 389 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 DDX18Q9NVP1 670 aaKnown RBP12.13□□□□□ -0.47
PBX1-212ENST00000540236 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
PBX1-212ENST00000540236 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 DDR1Q08345 913 aa12.12□□□□□ -0.47
PBX1-212ENST00000540236 TRIP13Q15645 432 aaPredicted RBP12.12□□□□□ -0.47
PBX1-212ENST00000540236 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms