RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CCDC155Q8N6L0 562 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 ANKRD13CQ8N6S4 541 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 TUBGCP2Q9BSJ2 902 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 FUT8Q9BYC5 575 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 TCP11L1Q9NUJ3 509 aa15.32■□□□□ 0.04
BNIP3-202ENST00000540159 RCCD1A6NED2 376 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 KLRC4O43908 158 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 BAG3O95817 575 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 GRM4Q14833 912 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 UBE2SQ16763 222 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
BNIP3-202ENST00000540159 RABGGTAQ92696 567 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 LACRTQ9GZZ8 138 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 RMND1Q9NWS8 449 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 BARHL2Q9NY43 387 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 TDP2O95551 362 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
BNIP3-202ENST00000540159 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 DGKHQ86XP1 1220 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 POLD4Q9HCU8 107 aa15.31■□□□□ 0.04
BNIP3-202ENST00000540159 THRAP3Q9Y2W1 955 aaKnown RBP15.31■□□□□ 0.04
BNIP3-202ENST00000540159 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 TNNI2P48788 182 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SBK1Q52WX2 424 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 MKRN1Q9UHC7 482 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SEMA3EO15041 775 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 LMAN1P49257 510 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SPTY2D1Q68D10 685 aaPredicted RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 WDR59Q6PJI9 974 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 RPGRQ92834 1020 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 NUDT12Q9BQG2 462 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 NAA15Q9BXJ9 866 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 VPS18Q9P253 973 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SEC63Q9UGP8 760 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 OR52Z1P0C646 297 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SCNN1DP51172 638 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 FAM193AP78312 1265 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 STIM1Q13586 685 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 CTAGE6Q86UF2 777 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 CTAGE4Q8IX94 777 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 OR8K1Q8NGG5 319 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 NOC4LQ9BVI4 516 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 SMARCAL1Q9NZC9 954 aa15.3■□□□□ 0.04
BNIP3-202ENST00000540159 TTF2Q9UNY4 1162 aaKnown RBP15.3■□□□□ 0.04
BNIP3-202ENST00000540159 PCP11498 1178 aaKnown RBP15.29■□□□□ 0.04
BNIP3-202ENST00000540159 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
BNIP3-202ENST00000540159 WDR66Q8TBY9 1149 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
BNIP3-202ENST00000540159 H7C1D1 291 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
BNIP3-202ENST00000540159 EPHB6O15197 1021 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 SLC37A4O43826 429 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 CXCR5P32302 372 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 HERVK_113P62684 666 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 GTF2IP78347 998 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 SPAG1Q07617 926 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 NONOQ15233 471 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■□□□□ 11.2
BNIP3-202ENST00000540159 CCDC148Q8NFR7 591 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 TRIM9Q9C026 710 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 MYO6Q9UM54 1294 aa15.29■□□□□ 0.04
BNIP3-202ENST00000540159 LGALS16A8MUM7 142 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TNNT3P45378 269 aaPredicted RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 APBA1Q02410 837 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 RTFDC1Q9BY42 306 aaPredicted RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TANGO6Q9C0B7 1094 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 MMRN2Q9H8L6 949 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 JADE2Q9NQC1 790 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 PCNTO95613 3336 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 M0R2N6 131 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 CACNB3P54284 484 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TRAPPC3LQ5T215 181 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TTBK2Q6IQ55 1244 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 ZNF804AQ7Z570 1209 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 MMS19Q96T76 1030 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 PALM3A6NDB9 673 aaPredicted RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 MARCH6O60337 910 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 PPARDQ03181 441 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 RRP36Q96EU6 259 aaKnown RBP15.28■□□□□ 0.04
BNIP3-202ENST00000540159 EHD2Q9NZN4 543 aa15.28■□□□□ 0.04
BNIP3-202ENST00000540159 FLT1P17948 1338 aa15.27■□□□□ 0.04
BNIP3-202ENST00000540159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.04
BNIP3-202ENST00000540159 LRRC10BA6NIK2 292 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms