RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 RBM28Q9NW13 759 aaKnown RBP25.64■■□□□ 1.7
TRIM65-202ENST00000540128 INHAP05111 366 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 PGK2P07205 417 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 UBXN2AP68543 259 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 APOBRQ0VD83 1088 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 MAP3K21Q5TCX8 1036 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 TMTC3Q6ZXV5 915 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 FBXO11Q86XK2 927 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 RAB11FIP4Q86YS3 637 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 RGS22Q8NE09 1264 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 AMNQ9BXJ7 453 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 A1CFQ9NQ94 594 aaKnown RBP25.63■■□□□ 1.69
TRIM65-202ENST00000540128 FAM217BQ9NTX9 383 aaPredicted RBP25.63■■□□□ 1.69
TRIM65-202ENST00000540128 PDRG1Q9NUG6 133 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 FLRT1Q9NZU1 646 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 BIN2Q9UBW5 565 aaPredicted RBP25.63■■□□□ 1.69
TRIM65-202ENST00000540128 HTTP42858 3142 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 PFASO15067 1338 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 ABCB11O95342 1321 aa25.63■■□□□ 1.69
TRIM65-202ENST00000540128 KIAA0100Q14667 2235 aaKnown RBP25.62■■□□□ 1.69
TRIM65-202ENST00000540128 PNMA6FA0A0J9YX94 578 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 PPP1R11O60927 126 aaPredicted RBP25.62■■□□□ 1.69
TRIM65-202ENST00000540128 PLEKHA8P1O95397 391 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 TAL1P17542 331 aaPredicted RBP25.62■■□□□ 1.69
TRIM65-202ENST00000540128 TRAF1Q13077 416 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 RTN1Q16799 776 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 CCDC144CPQ8IYA2 1237 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 MAML3Q96JK9 1138 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 PIGSQ96S52 555 aa25.62■■□□□ 1.69
TRIM65-202ENST00000540128 NID2Q14112 1375 aa25.61■■□□□ 1.69
TRIM65-202ENST00000540128 FAM133AQ8N9E0 248 aa25.61■■□□□ 1.69
TRIM65-202ENST00000540128 CYP39A1Q9NYL5 469 aa25.61■■□□□ 1.69
TRIM65-202ENST00000540128 CCDC85CA6NKD9 419 aa25.6■■□□□ 1.69
TRIM65-202ENST00000540128 NFIBO00712 420 aa25.6■■□□□ 1.69
TRIM65-202ENST00000540128 FUT2Q10981 343 aa25.6■■□□□ 1.69
TRIM65-202ENST00000540128 USH1GQ495M9 461 aa25.6■■□□□ 1.69
TRIM65-202ENST00000540128 MFSD14CQ5VZR4 134 aa25.6■■□□□ 1.69
TRIM65-202ENST00000540128 ZNF467Q7Z7K2 595 aaPredicted RBP25.6■■□□□ 1.69
TRIM65-202ENST00000540128 MSL3Q8N5Y2 521 aaKnown RBP25.6■■□□□ 1.69
TRIM65-202ENST00000540128 MRPL11Q9Y3B7 192 aaKnown RBP25.6■■□□□ 1.69
TRIM65-202ENST00000540128 CCDC196A0A1B0GTZ2 297 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 GOLGA8AA7E2F4 631 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 GOLGA8BA8MQT2 603 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 PDIA3P30101 505 aaKnown RBP25.59■■□□□ 1.69
TRIM65-202ENST00000540128 RBM25P49756 843 aaKnown RBP25.59■■□□□ 1.69
TRIM65-202ENST00000540128 TRIM32Q13049 653 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 MTFR1Q15390 333 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 RRP36Q96EU6 259 aaKnown RBP25.59■■□□□ 1.69
TRIM65-202ENST00000540128 ZNF274Q96GC6 653 aaPredicted RBP25.59■■□□□ 1.69
TRIM65-202ENST00000540128 FGD4Q96M96 766 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 C22orf23Q9BZE7 217 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 PCDHA1Q9Y5I3 950 aa25.59■■□□□ 1.69
TRIM65-202ENST00000540128 POTEB2H3BUK9 544 aa25.58■■□□□ 1.69
TRIM65-202ENST00000540128 CDC27P30260 824 aa25.58■■□□□ 1.69
TRIM65-202ENST00000540128 METAP2P50579 478 aaKnown RBP eCLIP25.58■■□□□ 1.69
TRIM65-202ENST00000540128 CACNB2Q08289 660 aaPredicted RBP25.58■■□□□ 1.69
TRIM65-202ENST00000540128 MAMDC4Q6UXC1 1216 aa25.58■■□□□ 1.69
TRIM65-202ENST00000540128 NSMFQ6X4W1 530 aa25.58■■□□□ 1.69
TRIM65-202ENST00000540128 HOMER1Q86YM7 354 aa25.58■■□□□ 1.69
TRIM65-202ENST00000540128 CMTR1Q8N1G2 835 aaKnown RBP25.58■■□□□ 1.69
TRIM65-202ENST00000540128 CCL5P13501 91 aa25.57■■□□□ 1.68
TRIM65-202ENST00000540128 CNTN2Q02246 1040 aa25.57■■□□□ 1.68
TRIM65-202ENST00000540128 GHRHRQ02643 423 aa25.57■■□□□ 1.68
TRIM65-202ENST00000540128 BAATQ14032 418 aaPredicted RBP25.57■■□□□ 1.68
TRIM65-202ENST00000540128 TINF2Q9BSI4 451 aa25.57■■□□□ 1.68
TRIM65-202ENST00000540128 UNC93B1Q9H1C4 597 aa25.57■■□□□ 1.68
TRIM65-202ENST00000540128 RPTORQ8N122 1335 aa25.57■■□□□ 1.68
TRIM65-202ENST00000540128 PRKAR2AP13861 404 aaKnown RBP25.56■■□□□ 1.68
TRIM65-202ENST00000540128 ADD1P35611 737 aaKnown RBP25.56■■□□□ 1.68
TRIM65-202ENST00000540128 RNF207Q6ZRF8 634 aa25.56■■□□□ 1.68
TRIM65-202ENST00000540128 MCF2L2Q86YR7 1114 aa25.56■■□□□ 1.68
TRIM65-202ENST00000540128 SAMD3Q8N6K7 520 aa25.56■■□□□ 1.68
TRIM65-202ENST00000540128 KIF2CQ99661 725 aa25.56■■□□□ 1.68
TRIM65-202ENST00000540128 PAK6Q9NQU5 681 aaPredicted RBP25.56■■□□□ 1.68
TRIM65-202ENST00000540128 NRBP1Q9UHY1 535 aa25.56■■□□□ 1.68
TRIM65-202ENST00000540128 NAP1L2Q9ULW6 460 aaPredicted RBP25.56■■□□□ 1.68
TRIM65-202ENST00000540128 SOWAHBA6NEL2 793 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 OPLAHO14841 1288 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 CYP2C19P33261 490 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 RPS6P62753 249 aaKnown RBP25.55■■□□□ 1.68
TRIM65-202ENST00000540128 ANKRD1Q15327 319 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 TMEM106CQ9BVX2 250 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 RNF208Q9H0X6 261 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
TRIM65-202ENST00000540128 SYNGAP1Q96PV0 1343 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 MYH6P13533 1939 aa25.55■■□□□ 1.68
TRIM65-202ENST00000540128 GJB1P08034 283 aa25.54■■□□□ 1.68
TRIM65-202ENST00000540128 NEK4P51957 841 aa25.54■■□□□ 1.68
TRIM65-202ENST00000540128 CCDC82Q8N4S0 544 aa25.54■■□□□ 1.68
TRIM65-202ENST00000540128 TBC1D5Q92609 795 aa25.54■■□□□ 1.68
TRIM65-202ENST00000540128 BACH2Q9BYV9 841 aa25.54■■□□□ 1.68
TRIM65-202ENST00000540128 MAP3K20Q9NYL2 800 aaKnown RBP25.54■■□□□ 1.68
TRIM65-202ENST00000540128 SEC63Q9UGP8 760 aaKnown RBP25.54■■□□□ 1.68
TRIM65-202ENST00000540128 CNTNAP5Q8WYK1 1306 aa25.54■■□□□ 1.68
TRIM65-202ENST00000540128 LOC102724159A0A0B4J2E5 919 aa25.53■■□□□ 1.68
TRIM65-202ENST00000540128 PTPDC1A2A3K4 754 aa25.53■■□□□ 1.68
TRIM65-202ENST00000540128 PWP2Q15269 919 aaKnown RBP25.53■■□□□ 1.68
TRIM65-202ENST00000540128 NTRK3Q16288 839 aa25.53■■□□□ 1.68
TRIM65-202ENST00000540128 PIBF1Q8WXW3 757 aa25.53■■□□□ 1.68
TRIM65-202ENST00000540128 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.53■■□□□ 1.683e-6■■■■□ 19.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms