RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 WWC2Q6AWC2 1192 aa11.15□□□□□ -0.63
TRAF1-202ENST00000540010 PODNQ7Z5L7 613 aa11.15□□□□□ -0.63
TRAF1-202ENST00000540010 ENGASEQ8NFI3 743 aa11.15□□□□□ -0.63
TRAF1-202ENST00000540010 UIMC1Q96RL1 719 aa11.15□□□□□ -0.63
TRAF1-202ENST00000540010 KLRF2D3W0D1 207 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 PPIP5K2O43314 1243 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 COBLO75128 1261 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 NT5C2P49902 561 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 STAG2Q8N3U4 1231 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 OTUD6BQ8N6M0 293 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 TNNI2P48788 182 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 KIAA0753Q2KHM9 967 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 TTC38Q5R3I4 469 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 IL17RBQ9NRM6 502 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 MYH13Q9UKX3 1938 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 FAM170AA1A519 330 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 OPA1O60313 960 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 CNTNAP5Q8WYK1 1306 aa11.14□□□□□ -0.63
TRAF1-202ENST00000540010 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 ECE2O60344 883 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 SEC31AO94979 1220 aaKnown RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 SF3A3Q12874 501 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 ZSCAN26Q16670 478 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CSGALNACT2Q8N6G5 542 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 FAM76AQ8TAV0 307 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 RRP36Q96EU6 259 aaKnown RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 NOC4LQ9BVI4 516 aaKnown RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 SERPINB13Q9UIV8 391 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 EP400Q96L91 3159 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 C21orf2O43822 256 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CACNB3P54284 484 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 PKN1Q16512 942 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CEP95Q96GE4 821 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 PHF20Q9BVI0 1012 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CRKP46108 304 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 RHBDL3P58872 404 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 PDE4DQ08499 809 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 PTPAQ15257 358 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 AOC3Q16853 763 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 TTC31Q49AM3 519 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CFAP58Q5T655 872 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 SYCP3Q8IZU3 236 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 LRRC47Q8N1G4 583 aaKnown RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 HPDP32754 393 aaPredicted RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 GRM4Q14833 912 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 RBM43Q6ZSC3 357 aaKnown RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 CERS5Q8N5B7 392 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 NEDD1Q8NHV4 660 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
TRAF1-202ENST00000540010 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
TRAF1-202ENST00000540010 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 NID2Q14112 1375 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 GAKO14976 1311 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 TRAF5O00463 557 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
TRAF1-202ENST00000540010 DMTNQ08495 405 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 RESP18Q5W5W9 173 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 SUPT20HQ8NEM7 779 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 MYH2Q9UKX2 1941 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 FRMPD2Q68DX3 1309 aaPredicted RBP11.12□□□□□ -0.63
TRAF1-202ENST00000540010 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 PAK1Q13153 545 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 CYP26C1Q6V0L0 522 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 KCNQ5Q9NR82 932 aa11.12□□□□□ -0.63
TRAF1-202ENST00000540010 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
TRAF1-202ENST00000540010 NDUFAB1O14561 156 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 TMTC1Q8IUR5 882 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 AFAP1L1Q8TED9 768 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 PPP1R13BQ96KQ4 1090 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 CSRNP2Q9H175 543 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 BAZ2BQ9UIF8 2168 aaKnown RBP11.11□□□□□ -0.63
TRAF1-202ENST00000540010 TUBBP07437 444 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
TRAF1-202ENST00000540010 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 BICDL2A1A5D9 508 aa11.11□□□□□ -0.63
TRAF1-202ENST00000540010 GCOM1H8Y6P7 765 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-202ENST00000540010 MYZAPP0CAP1 466 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms