RNA–Protein interactions for RNA: ENST00000539994.5

GTF2H3-208, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-208ENST00000539994 FSTL1Q12841 308 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 SLBPQ14493 270 aaKnown RBP eCLIP5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 CDKAL1Q5VV42 579 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 LRFN4Q6PJG9 635 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 MPZL3Q6UWV2 235 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 FAM169BQ8N8A8 192 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 LRRC3Q9BY71 257 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 FOXQ1Q9C009 403 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 NSUN3Q9H649 340 aaKnown RBP5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 PCDHB5Q9Y5E4 795 aa5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 WRNQ14191 1432 aaPredicted RBP eCLIP5.3□□□□□ -1.56
GTF2H3-208ENST00000539994 DHX57Q6P158 1386 aaKnown RBP5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 CFAP74Q9C0B2 1584 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 NCANO14594 1321 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 FAM221BA6H8Z2 402 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 LBX1P52954 281 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 HNRNPUQ00839 825 aaKnown RBP eCLIP5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 SEPT6Q14141 434 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 TNNI3KQ59H18 835 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 TMEM67Q5HYA8 995 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 TTLL10Q6ZVT0 673 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 GATAD2BQ8WXI9 593 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 RNPC3Q96LT9 517 aaKnown RBP5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 PPP1R16BQ96T49 567 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 MIR1-1HGQ9H1L0 117 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 PCDHA4Q9UN74 947 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 CAPN6Q9Y6Q1 641 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 ROBO2Q9HCK4 1378 aa5.29□□□□□ -1.56
GTF2H3-208ENST00000539994 MEGF6O75095 1541 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 LRIG2O94898 1065 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 CLSTN1O94985 981 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 KCNA6P17658 529 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 MCM4P33991 863 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 GDNFP39905 211 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 BUD31P41223 144 aaPredicted RBP5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 EIF6P56537 245 aaKnown RBP5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 ERVFC1P60507 584 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 MPP2Q14168 576 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 PTPROQ16827 1216 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 CWF19L2Q2TBE0 894 aaKnown RBP5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 FBXW10Q5XX13 1052 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 LLGL2Q6P1M3 1020 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 CELF2-AS1Q8N7Q2 184 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 JARID2Q92833 1246 aaPredicted RBP5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 FERD3LQ96RJ6 166 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 MIPEPQ99797 713 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 CD320Q9NPF0 282 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 PICK1Q9NRD5 415 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 DIP2CQ9Y2E4 1556 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 EFCAB6Q5THR3 1501 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 FAM135AQ9P2D6 1515 aa5.28□□□□□ -1.56
GTF2H3-208ENST00000539994 DNAJC25-GNG10A0A024R161 153 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 PRAMEF27A3QJZ7 478 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 FAM221AA4D161 298 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 WASH4PA8MWX3 477 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 NPIPB6E9PJ23 425 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 PLCH2O75038 1416 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 RGPD1P0DJD0 1748 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 HNRNPMP52272 730 aaKnown RBP eCLIP5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 TIAM1Q13009 1591 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 PTCH1Q13635 1447 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 RALGPS1Q5JS13 557 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 C22orf34Q6ZV56 151 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 REC114Q7Z4M0 266 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 CCDC84Q86UT8 332 aaPredicted RBP5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 SIAH1Q8IUQ4 282 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 FBXO15Q8NCQ5 510 aaPredicted RBP5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 ZSCAN18Q8TBC5 510 aaPredicted RBP5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 GAL3ST3Q96A11 431 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 PLPPR2Q96GM1 343 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 ACTR10Q9NZ32 417 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 TPX2Q9ULW0 747 aaKnown RBP5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 MSRB2Q9Y3D2 182 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 SAMM50Q9Y512 469 aa5.27□□□□□ -1.57
GTF2H3-208ENST00000539994 GLI3P10071 1580 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 hCG_2014768A0A024R1R8 64 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 FAM155AB1AL88 458 aaPredicted RBP5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 PRRG2O14669 202 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 CILPO75339 1184 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 BPNT1O95861 308 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 GIPRP48546 466 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 ZNF165P49910 485 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 DDR2Q16832 855 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 SFRP5Q5T4F7 317 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 RNF187Q5TA31 235 aaPredicted RBP5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 GK5Q6ZS86 529 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 BRINP3Q76B58 766 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 CDC37L1Q7L3B6 337 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 LRP10Q7Z4F1 713 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 LSRQ86X29 649 aaPredicted RBP5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 SH3TC2Q8TF17 1288 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 ELMO3Q96BJ8 720 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 KANSL2Q9H9L4 492 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 ST7Q9NRC1 585 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 ZNRF3Q9ULT6 936 aa5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 ZC3H13Q5T200 1668 aaKnown RBP5.26□□□□□ -1.57
GTF2H3-208ENST00000539994 PRDM15P57071 1507 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms