RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 NR5A1Q13285 461 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 RRP1BQ14684 758 aaKnown RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 NECTIN1Q15223 517 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 TAF1CQ15572 869 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 IFIT1BQ5T764 474 aaKnown RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 NFXL1Q6ZNB6 911 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 DGKHQ86XP1 1220 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 NEK1Q96PY6 1258 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 ZSCAN10Q96SZ4 725 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 IL25Q9H293 177 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 VCPKMTQ9H867 229 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 TCP11L1Q9NUJ3 509 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 HOXC10Q9NYD6 342 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 ZSWIM5Q9P217 1185 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 AGTPBP1Q9UPW5 1226 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 SLC45A1Q9Y2W3 748 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 TMX2Q9Y320 296 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 AK9Q5TCS8 1911 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 CCDC69A6NI79 296 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 BTBD19C9JJ37 291 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 F5H6K3 240 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 LCE2BO14633 110 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 AXIN1O15169 862 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 WDR46O15213 610 aaKnown RBP7.57□□□□□ -1.2
SNHG1-212ENST00000539975 SLC1A4P43007 532 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 GCLCP48506 637 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-212ENST00000539975 CTCFP49711 727 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-212ENST00000539975 KLRC3Q07444 240 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 COG2Q14746 738 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 WTAPQ15007 396 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 TMEM67Q5HYA8 995 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 BLOC1S2Q6QNY1 142 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 CATIPQ7Z7H3 387 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 TBC1D10CQ8IV04 446 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 JMYQ8N9B5 988 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 CHURC1Q8WUH1 139 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 BRI3BPQ8WY22 251 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 HPS1Q92902 700 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 MKL1Q969V6 931 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 TMEM87BQ96K49 555 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 ZKSCAN3Q9BRR0 538 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 INCENPQ9NQS7 918 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 AAASQ9NRG9 546 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 RNF186Q9NXI6 227 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-212ENST00000539975 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
SNHG1-212ENST00000539975 NEDD4P46934 1319 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 SMIM22K7EJ46 135 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 PRC1O43663 620 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 FLOT1O75955 427 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 BMP3P12645 472 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-212ENST00000539975 HSPA4P34932 840 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 CCNA1P78396 465 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 JAG1P78504 1218 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 CCDC96Q2M329 555 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 TSGA10IPQ3SY00 556 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 SLFN13Q68D06 897 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
SNHG1-212ENST00000539975 SPICE1Q8N0Z3 855 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 LRRC47Q8N1G4 583 aaKnown RBP7.56□□□□□ -1.2
SNHG1-212ENST00000539975 GMCL1P1Q8NEA9 526 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 ACER1Q8TDN7 264 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 C12orf42Q96LP6 360 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 JAKMIP1Q96N16 626 aaKnown RBP7.56□□□□□ -1.2
SNHG1-212ENST00000539975 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 RPAP3Q9H6T3 665 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-212ENST00000539975 NAP1L2Q9ULW6 460 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-212ENST00000539975 CYP46A1Q9Y6A2 500 aa7.56□□□□□ -1.2
SNHG1-212ENST00000539975 TRPM7Q96QT4 1865 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 TNKSO95271 1327 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 A0A1W2PRG0 241 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 IGF2BP3O00425 579 aaKnown RBP eCLIP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 DHX16O60231 1041 aaKnown RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 NMT2O60551 498 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 TLR2O60603 784 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 ZBED4O75132 1171 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 TBC1D8O95759 1140 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 HSPA1AP0DMV8 641 aaKnown RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 HSPA1BP0DMV9 641 aaKnown RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 CALM1P0DP23 149 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 CALM2P0DP24 149 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 CALM3P0DP25 149 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 VCAM1P19320 739 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 KIF5BP33176 963 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 STAT2P52630 851 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 ANAPC15P60006 121 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 SHROOM1Q2M3G4 852 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 TREML2Q5T2D2 321 aa7.55□□□□□ -1.2
SNHG1-212ENST00000539975 GPATCH4Q5T3I0 446 aaKnown RBP7.55□□□□□ -1.2
SNHG1-212ENST00000539975 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms