RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 APOA5Q6Q788 366 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 FBXO11Q86XK2 927 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 CLEC4DQ8WXI8 215 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 HMX1Q9NP08 348 aaPredicted RBP15.61■□□□□ 0.09
PRPF19-204ENST00000539960 A1CFQ9NQ94 594 aaKnown RBP15.61■□□□□ 0.09
PRPF19-204ENST00000539960 RPTORQ8N122 1335 aa15.61■□□□□ 0.09
PRPF19-204ENST00000539960 POTEFA5A3E0 1075 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 GJB1P08034 283 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
PRPF19-204ENST00000539960 CYP2C19P33261 490 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 USH1GQ495M9 461 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 NSMFQ6X4W1 530 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 RAB11FIP4Q86YS3 637 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 CCDC144CPQ8IYA2 1237 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 SRBD1Q8N5C6 995 aaKnown RBP15.6■□□□□ 0.09
PRPF19-204ENST00000539960 BRF1Q92994 677 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 PIGSQ96S52 555 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 SPZ1Q9BXG8 430 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 AGXT2Q9BYV1 514 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 CYP39A1Q9NYL5 469 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 PFASO15067 1338 aa15.6■□□□□ 0.09
PRPF19-204ENST00000539960 PNMA6FA0A0J9YX94 578 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 KLF18A0A0U1RQI7 1052 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 POTEB2H3BUK9 544 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 NFIBO00712 420 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 ZBTB43O43298 467 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 CNTN2Q02246 1040 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 APOBRQ0VD83 1088 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 BAATQ14032 418 aaPredicted RBP15.59■□□□□ 0.09
PRPF19-204ENST00000539960 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
PRPF19-204ENST00000539960 MICU3Q86XE3 530 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 FAM133AQ8N9E0 248 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 RGS22Q8NE09 1264 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 IL17RAQ96F46 866 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 TINF2Q9BSI4 451 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 AMNQ9BXJ7 453 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 MRPL11Q9Y3B7 192 aaKnown RBP15.59■□□□□ 0.09
PRPF19-204ENST00000539960 ABCB11O95342 1321 aa15.59■□□□□ 0.09
PRPF19-204ENST00000539960 PPP1R11O60927 126 aaPredicted RBP15.58■□□□□ 0.08
PRPF19-204ENST00000539960 PLEKHA8P1O95397 391 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 EN2P19622 333 aaPredicted RBP15.58■□□□□ 0.08
PRPF19-204ENST00000539960 RCAN1P53805 252 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 EVCP57679 992 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 TRAF1Q13077 416 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 PPP2R5BQ15173 497 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 MAMDC4Q6UXC1 1216 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 HOMER1Q86YM7 354 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 MSL3Q8N5Y2 521 aaKnown RBP15.58■□□□□ 0.08
PRPF19-204ENST00000539960 FGD4Q96M96 766 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 UPF3BQ9BZI7 483 aaKnown RBP15.58■□□□□ 0.08
PRPF19-204ENST00000539960 MAF1Q9H063 256 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.58■□□□□ 0.08
PRPF19-204ENST00000539960 PAK6Q9NQU5 681 aaPredicted RBP15.58■□□□□ 0.08
PRPF19-204ENST00000539960 PCDHA1Q9Y5I3 950 aa15.58■□□□□ 0.08
PRPF19-204ENST00000539960 PTPDC1A2A3K4 754 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 SOWAHBA6NEL2 793 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 SGPL1O95470 568 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 GJA8P48165 433 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 RGS19P49795 217 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 RTN1Q16799 776 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 PRAMEF19Q5SWL8 479 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 RNF207Q6ZRF8 634 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 TMTC3Q6ZXV5 915 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 MCF2L2Q86YR7 1114 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 CMTR1Q8N1G2 835 aaKnown RBP15.57■□□□□ 0.08
PRPF19-204ENST00000539960 CCDC82Q8N4S0 544 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 TRPV1Q8NER1 839 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 TBC1D5Q92609 795 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 RRP36Q96EU6 259 aaKnown RBP15.57■□□□□ 0.08
PRPF19-204ENST00000539960 DEFB118Q96PH6 123 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 FAM217BQ9NTX9 383 aaPredicted RBP15.57■□□□□ 0.08
PRPF19-204ENST00000539960 PDRG1Q9NUG6 133 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 RBM28Q9NW13 759 aaKnown RBP15.57■□□□□ 0.08
PRPF19-204ENST00000539960 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
PRPF19-204ENST00000539960 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
PRPF19-204ENST00000539960 CENPFP49454 3210 aa15.56■□□□□ 0.08
PRPF19-204ENST00000539960 GOLGA8AA7E2F4 631 aa15.56■□□□□ 0.08
PRPF19-204ENST00000539960 GOLGA8BA8MQT2 603 aa15.56■□□□□ 0.08
PRPF19-204ENST00000539960 SNAI1O95863 264 aaPredicted RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 CAPN2P17655 700 aa15.56■□□□□ 0.08
PRPF19-204ENST00000539960 CCND3P30281 292 aaPredicted RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 RPS6P62753 249 aaKnown RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 TOB2Q14106 344 aaPredicted RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 PIBF1Q8WXW3 757 aa15.56■□□□□ 0.08
PRPF19-204ENST00000539960 PURBQ96QR8 312 aaKnown RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 NRBP1Q9UHY1 535 aa15.56■□□□□ 0.08
PRPF19-204ENST00000539960 ZNFX1Q9P2E3 1918 aaKnown RBP15.56■□□□□ 0.08
PRPF19-204ENST00000539960 SYNGAP1Q96PV0 1343 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 CCDC196A0A1B0GTZ2 297 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 TFRCP02786 760 aaKnown RBP15.55■□□□□ 0.08
PRPF19-204ENST00000539960 CYBAP13498 195 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 CALML3P27482 149 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 CNGA1P29973 690 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 PDIA3P30101 505 aaKnown RBP15.55■□□□□ 0.08
PRPF19-204ENST00000539960 ADD1P35611 737 aaKnown RBP15.55■□□□□ 0.08
PRPF19-204ENST00000539960 FUT2Q10981 343 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 CRISPLD2Q9H0B8 497 aa15.55■□□□□ 0.08
PRPF19-204ENST00000539960 ALDH8A1Q9H2A2 487 aaPredicted RBP15.55■□□□□ 0.08
PRPF19-204ENST00000539960 SEC63Q9UGP8 760 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms