RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ALAS1P13196 640 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 PTPREP23469 700 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 GNAQP50148 359 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 PRKCZQ05513 592 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 PPP2R5BQ15173 497 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 USH1GQ495M9 461 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 WWC2Q6AWC2 1192 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 NCAPG2Q86XI2 1143 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 NSUN7Q8NE18 718 aaKnown RBP15.06■□□□□ 0
CCDC42-202ENST00000539522 GPKOWQ92917 476 aaPredicted RBP eCLIP15.06■□□□□ 0
CCDC42-202ENST00000539522 ERO1AQ96HE7 468 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 AIFM3Q96NN9 605 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 TRERF1Q96PN7 1200 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 MROH8Q9H579 483 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 RNF146Q9NTX7 359 aa15.06■□□□□ 0
CCDC42-202ENST00000539522 PRPF3O43395 683 aaKnown RBP15.05■□□□□ -0
CCDC42-202ENST00000539522 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
CCDC42-202ENST00000539522 JAK2O60674 1132 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 SLC25A27O95847 323 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 MAPK4P31152 587 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 SLC4A3P48751 1232 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 FCGRTP55899 365 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 PLEKHH3Q7Z736 793 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 FBXO11Q86XK2 927 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 NPLOC4Q8TAT6 608 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 TMX3Q96JJ7 454 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
CCDC42-202ENST00000539522 A1CFQ9NQ94 594 aaKnown RBP15.05■□□□□ -0
CCDC42-202ENST00000539522 FLRT1Q9NZU1 646 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 COL20A1Q9P218 1284 aa15.05■□□□□ -0
CCDC42-202ENST00000539522 DDX49Q9Y6V7 483 aaKnown RBP15.05■□□□□ -0
CCDC42-202ENST00000539522 STXBP3O00186 592 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 TNPO2O14787 897 aaKnown RBP15.04■□□□□ -0
CCDC42-202ENST00000539522 ST18O60284 1047 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 FMNL1O95466 1100 aaPredicted RBP15.04■□□□□ -0
CCDC42-202ENST00000539522 PGK2P07205 417 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 CCNA1P78396 465 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 GHRHRQ02643 423 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
CCDC42-202ENST00000539522 SLC30A10Q6XR72 485 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 CHST13Q8NET6 341 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 RRP36Q96EU6 259 aaKnown RBP15.04■□□□□ -0
CCDC42-202ENST00000539522 AMNQ9BXJ7 453 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 GJB4Q9NTQ9 266 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 SRRDQ9UH36 339 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 PCDHA1Q9Y5I3 950 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 MCM3APO60318 1980 aa15.04■□□□□ -0
CCDC42-202ENST00000539522 ABCB11O95342 1321 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 ADORA2AP29274 412 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 MCM2P49736 904 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 FLT3LGP49771 235 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 CNTN2Q02246 1040 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 NPY5RQ15761 445 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 CCL14Q16627 93 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 ZNF792Q3KQV3 632 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 TKFCQ3LXA3 575 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 HSCBQ8IWL3 235 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 SMARCC2Q8TAQ2 1214 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 RNF26Q9BY78 433 aaPredicted RBP15.03■□□□□ -0
CCDC42-202ENST00000539522 ACAD9Q9H845 621 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 CYP39A1Q9NYL5 469 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 TRIM17Q9Y577 477 aa15.03■□□□□ -0
CCDC42-202ENST00000539522 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 SOWAHBA6NEL2 793 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 HOXC6P09630 235 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 BAATQ14032 418 aaPredicted RBP15.02■□□□□ -0
CCDC42-202ENST00000539522 WDR78Q5VTH9 848 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 ABRAQ8N0Z2 381 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 FAM133AQ8N9E0 248 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 MMP19Q99542 508 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 PTPN22Q9Y2R2 807 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 PTCH2Q9Y6C5 1203 aa15.02■□□□□ -0
CCDC42-202ENST00000539522 STK36Q9NRP7 1315 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 PTPDC1A2A3K4 754 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 MEIS2O14770 477 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 SCG2P13521 617 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 HSD17B4P51659 736 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 TRIM32Q13049 653 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 MAP2K5Q13163 448 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 CUL4AQ13619 759 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 COL13A1Q5TAT6 717 aaPredicted RBP15.01□□□□□ -0.01
CCDC42-202ENST00000539522 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
CCDC42-202ENST00000539522 TRIB2Q92519 343 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 ZSCAN31Q96LW9 406 aaPredicted RBP15.01□□□□□ -0.01
CCDC42-202ENST00000539522 BARHL2Q9NY43 387 aa15.01□□□□□ -0.01
CCDC42-202ENST00000539522 CTDP1Q9Y5B0 961 aaPredicted RBP15.01□□□□□ -0.01
CCDC42-202ENST00000539522 STRNO43815 780 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 FCER1AP12319 257 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 CYP2B6P20813 491 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 COPB2P35606 906 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 RPS6P62753 249 aaKnown RBP15□□□□□ -0.01
CCDC42-202ENST00000539522 IRF5Q13568 498 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 KIF22Q14807 665 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 HEATR3Q7Z4Q2 680 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 RGS22Q8NE09 1264 aa15□□□□□ -0.01
CCDC42-202ENST00000539522 SYTL5Q8TDW5 730 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms