RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MYADML2A6NDP7 307 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 MOXD2PA6NHM9 499 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 KDM4AO75164 1064 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 CST5P28325 142 aaPredicted RBP26.08■■□□□ 1.77
SCARB1-206ENST00000539320 ACLYP53396 1101 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 TLE2Q04725 743 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 CCDC178Q5BJE1 867 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 IQCA1Q86XH1 822 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 UPF3AQ9H1J1 476 aaKnown RBP26.08■■□□□ 1.77
SCARB1-206ENST00000539320 SPC25Q9HBM1 224 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 RAD50Q92878 1312 aa26.08■■□□□ 1.77
SCARB1-206ENST00000539320 B4E1Z4 1266 aa26.07■■□□□ 1.76
SCARB1-206ENST00000539320 C6orf222P0C671 652 aaPredicted RBP26.07■■□□□ 1.76
SCARB1-206ENST00000539320 DGKHQ86XP1 1220 aa26.07■■□□□ 1.76
SCARB1-206ENST00000539320 IL25Q9H293 177 aa26.07■■□□□ 1.76
SCARB1-206ENST00000539320 STARD7Q9NQZ5 370 aa26.07■■□□□ 1.76
SCARB1-206ENST00000539320 PNMA2Q9UL42 364 aa26.07■■□□□ 1.76
SCARB1-206ENST00000539320 ASTN1O14525 1302 aa26.07■■□□□ 1.76
SCARB1-206ENST00000539320 GJA9P57773 515 aa26.06■■□□□ 1.76
SCARB1-206ENST00000539320 GPATCH4Q5T3I0 446 aaKnown RBP26.06■■□□□ 1.76
SCARB1-206ENST00000539320 CCSAPQ6IQ19 270 aaPredicted RBP26.06■■□□□ 1.76
SCARB1-206ENST00000539320 NUP133Q8WUM0 1156 aa26.06■■□□□ 1.76
SCARB1-206ENST00000539320 WDR19Q8NEZ3 1342 aa26.06■■□□□ 1.76
SCARB1-206ENST00000539320 NFIBO00712 420 aa26.05■■□□□ 1.76
SCARB1-206ENST00000539320 KCNA10Q16322 511 aa26.05■■□□□ 1.76
SCARB1-206ENST00000539320 PCSK9Q8NBP7 692 aaKnown RBP26.05■■□□□ 1.76
SCARB1-206ENST00000539320 PQBP1O60828 265 aaKnown RBP26.04■■□□□ 1.76
SCARB1-206ENST00000539320 CLTBP09497 229 aa26.04■■□□□ 1.76
SCARB1-206ENST00000539320 IRX5P78411 483 aaPredicted RBP26.04■■□□□ 1.76
SCARB1-206ENST00000539320 GPR153Q6NV75 609 aa26.04■■□□□ 1.76
SCARB1-206ENST00000539320 SH3RF1Q7Z6J0 888 aa26.04■■□□□ 1.76
SCARB1-206ENST00000539320 PNMA1Q8ND90 353 aa26.04■■□□□ 1.76
SCARB1-206ENST00000539320 KAT14Q9H8E8 782 aa26.04■■□□□ 1.76
SCARB1-206ENST00000539320 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-206ENST00000539320 TRIM43BA6NCK2 446 aa26.03■■□□□ 1.76
SCARB1-206ENST00000539320 TNFAIP2Q03169 654 aa26.03■■□□□ 1.76
SCARB1-206ENST00000539320 BAATQ14032 418 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-206ENST00000539320 FBXO16Q8IX29 292 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-206ENST00000539320 TRIM43Q96BQ3 446 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-206ENST00000539320 GLT1D1Q96MS3 346 aa26.03■■□□□ 1.76
SCARB1-206ENST00000539320 ZSCAN10Q96SZ4 725 aaPredicted RBP26.03■■□□□ 1.76
SCARB1-206ENST00000539320 KRT23Q9C075 422 aa26.03■■□□□ 1.76
SCARB1-206ENST00000539320 CNNM2Q9H8M5 875 aa26.03■■□□□ 1.76
SCARB1-206ENST00000539320 DDX49Q9Y6V7 483 aaKnown RBP26.03■■□□□ 1.76
SCARB1-206ENST00000539320 GOLGA8HP0CJ92 632 aa26.02■■□□□ 1.76
SCARB1-206ENST00000539320 NOL8Q76FK4 1167 aaKnown RBP26.02■■□□□ 1.76
SCARB1-206ENST00000539320 ENAHQ8N8S7 591 aaPredicted RBP26.02■■□□□ 1.76
SCARB1-206ENST00000539320 ANKS1AQ92625 1134 aa26.02■■□□□ 1.76
SCARB1-206ENST00000539320 BADQ92934 168 aa26.02■■□□□ 1.76
SCARB1-206ENST00000539320 ADD3Q9UEY8 706 aaKnown RBP26.02■■□□□ 1.76
SCARB1-206ENST00000539320 TNKSO95271 1327 aa26.02■■□□□ 1.76
SCARB1-206ENST00000539320 PTPDC1A2A3K4 754 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 ELP1O95163 1332 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 ASGR1P07306 291 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 NKX3-2P78367 333 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 SLC30A10Q6XR72 485 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 ANKRD33Q7Z3H0 272 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 TLK2Q86UE8 772 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 MORC4Q8TE76 937 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 RUFY2Q8WXA3 655 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 CLEC4DQ8WXI8 215 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 PURBQ96QR8 312 aaKnown RBP26.01■■□□□ 1.75
SCARB1-206ENST00000539320 UBAC1Q9BSL1 405 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 VTA1Q9NP79 307 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 ZSWIM5Q9P217 1185 aa26.01■■□□□ 1.75
SCARB1-206ENST00000539320 LOC102724159A0A0B4J2E5 919 aa26■■□□□ 1.75
SCARB1-206ENST00000539320 CTAGE5O15320 804 aa26■■□□□ 1.75
SCARB1-206ENST00000539320 ALDH5A1P51649 535 aaPredicted RBP26■■□□□ 1.75
SCARB1-206ENST00000539320 PWP2Q15269 919 aaKnown RBP26■■□□□ 1.75
SCARB1-206ENST00000539320 GNASQ5JWF2 1037 aa26■■□□□ 1.75
SCARB1-206ENST00000539320 EEPD1Q7L9B9 569 aa26■■□□□ 1.75
SCARB1-206ENST00000539320 TOX2Q96NM4 488 aa26■■□□□ 1.75
SCARB1-206ENST00000539320 GNEQ9Y223 722 aaKnown RBP26■■□□□ 1.75
SCARB1-206ENST00000539320 MROH7Q68CQ1 1323 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 DCDC2CA8MYV0 355 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 KIAA0355O15063 1070 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 ASPRV1Q53RT3 343 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 RNF207Q6ZRF8 634 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 UBA5Q9GZZ9 404 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 CPVLQ9H3G5 476 aa25.99■■□□□ 1.75
SCARB1-206ENST00000539320 A0A0U1RQG5 324 aaPredicted RBP25.98■■□□□ 1.75
SCARB1-206ENST00000539320 SMPD1P17405 629 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 CHMLP26374 656 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 CALML3P27482 149 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 BEX3Q00994 111 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 CDC37Q16543 378 aaPredicted RBP25.98■■□□□ 1.75
SCARB1-206ENST00000539320 TAPT1Q6NXT6 567 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 AP5M1Q9H0R1 490 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 PDGFCQ9NRA1 345 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 TMEM39AQ9NV64 488 aa25.98■■□□□ 1.75
SCARB1-206ENST00000539320 RAG1P15918 1043 aa25.97■■□□□ 1.75
SCARB1-206ENST00000539320 ITGB8P26012 769 aa25.97■■□□□ 1.75
SCARB1-206ENST00000539320 USH1GQ495M9 461 aa25.97■■□□□ 1.75
SCARB1-206ENST00000539320 IQSEC1Q6DN90 963 aa25.97■■□□□ 1.75
SCARB1-206ENST00000539320 VTI1AQ96AJ9 217 aa25.97■■□□□ 1.75
SCARB1-206ENST00000539320 PARP1P09874 1014 aaKnown RBP25.96■■□□□ 1.75
SCARB1-206ENST00000539320 RPS6P62753 249 aaKnown RBP25.96■■□□□ 1.75
SCARB1-206ENST00000539320 FAAP100Q0VG06 881 aa25.96■■□□□ 1.75
SCARB1-206ENST00000539320 FSCN1Q16658 493 aaKnown RBP25.96■■□□□ 1.75
SCARB1-206ENST00000539320 IFIT1BQ5T764 474 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms