RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PRR36Q9H6K5 1346 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 GSTM1P09488 218 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 GNA15P30679 374 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 RTP2Q5QGT7 225 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 ZNF585AQ6P3V2 769 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 USP48Q86UV5 1035 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 ZSCAN29Q8IWY8 852 aaPredicted RBP3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 GATAD2BQ8WXI9 593 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 FRMD6Q96NE9 622 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 ZNF341Q9BYN7 854 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 PDLIM7Q9NR12 457 aa3.7□□□□□ -1.82
CBX3P4-201ENST00000538909 SMARCA5O60264 1052 aaPredicted RBP3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 PF4P02776 101 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 P4HBP07237 508 aaKnown RBP3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 KIAA2012Q0VF49 1180 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 CAMK2GQ13555 558 aaPredicted RBP3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 FHL2Q14192 279 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 HLA-DQA1Q5Y7H0 255 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 BORAQ6PGQ7 559 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 CCDC84Q86UT8 332 aaPredicted RBP3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 DDX11Q96FC9 970 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 CDK5RAP1Q96SZ6 601 aaKnown RBP3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 MKRN2Q9H000 416 aaKnown RBP3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 DEF6Q9H4E7 631 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 RNF19AQ9NV58 838 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 LTBP3Q9NS15 1303 aa3.69□□□□□ -1.82
CBX3P4-201ENST00000538909 MROH6A6NGR9 719 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 CLEC3AO75596 197 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 RLBP1P12271 317 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 TGFB2P61812 414 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 MLECQ14165 292 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 MCTP2Q6DN12 878 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 FAM124AQ86V42 546 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 FBXO27Q8NI29 283 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 PCDHB12Q9Y5F1 795 aa3.68□□□□□ -1.82
CBX3P4-201ENST00000538909 TLR3O15455 904 aaKnown RBP3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 LMNB2Q03252 620 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 FAM160A1Q05DH4 1040 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 SMN1Q16637 294 aaKnown RBP3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 SPDYAQ5MJ70 313 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 ASB16Q96NS5 453 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 SYT3Q9BQG1 590 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 DSCC1Q9BVC3 393 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 SLC12A9Q9BXP2 914 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 C1orf115Q9H7X2 142 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 CD248Q9HCU0 757 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 PPP4R1LQ9P1A2 415 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 AK5Q9Y6K8 562 aa3.67□□□□□ -1.82
CBX3P4-201ENST00000538909 NPEPPSL1A6NEC2 478 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 NPIPB8E9PQR5 432 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 LAMTOR5O43504 91 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 INHBEP58166 350 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 CACNB2Q08289 660 aaPredicted RBP3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 RAD51AP2Q09MP3 1159 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 SNAP47Q5SQN1 464 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 C9orf131Q5VYM1 1079 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 OVOS1Q6IE37 1185 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 ZNF575Q86XF7 245 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 GORASP1Q9BQQ3 440 aa3.66□□□□□ -1.82
CBX3P4-201ENST00000538909 GSNP06396 782 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 CYP2C8P10632 490 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 THBS2P35442 1172 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 FAM26FQ5R3K3 315 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 CWF19L1Q69YN2 538 aaKnown RBP3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 REC114Q7Z4M0 266 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 STK32CQ86UX6 486 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 CHFRQ96EP1 664 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 TSPAN17Q96FV3 270 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 GMIPQ9P107 970 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 PCDHB14Q9Y5E9 798 aa3.65□□□□□ -1.83
CBX3P4-201ENST00000538909 H0Y8X5 98 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 MUSKO15146 869 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 GPR42O15529 346 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 B4GALT3O60512 393 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 C8BP07358 591 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 GLI4P10075 376 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 ACRP10323 421 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 RPL13P26373 211 aaKnown RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 GBP2P32456 591 aaPredicted RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 AUHQ13825 339 aaKnown RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 MPP2Q14168 576 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 CYP2R1Q6VVX0 501 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 CABP7Q86V35 215 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 CIR1Q86X95 450 aaPredicted RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 TMEM192Q8IY95 271 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 LINC00482Q8N8I6 264 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 GOLM1Q8NBJ4 401 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 TXNDC5Q8NBS9 432 aaKnown RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 IGDCC4Q8TDY8 1250 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 CPA5Q8WXQ8 436 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 DUSP9Q99956 384 aaKnown RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 NOC4LQ9BVI4 516 aaKnown RBP3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 TCAF1Q9Y4C2 921 aa3.64□□□□□ -1.83
CBX3P4-201ENST00000538909 MINDY4BA8MYZ0 360 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 DDX3XO00571 662 aaKnown RBP eCLIP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 FGF10O15520 208 aaPredicted RBP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 PRPF40AO75400 957 aaKnown RBP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 SELENOPP49908 381 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 HNRNPA0Q13151 305 aaKnown RBP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 TAF1CQ15572 869 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms