RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 TRIT1Q9H3H1 467 aaKnown RBP7.36□□□□□ -1.23
GCSHP4-201ENST00000538792 GPATCH2Q9NW75 528 aa7.36□□□□□ -1.23
GCSHP4-201ENST00000538792 FAM135BQ49AJ0 1406 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 ROBO1Q9Y6N7 1651 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 GDNFP39905 211 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 ZNF165P49910 485 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 NLRC3Q7RTR2 1065 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 ADAMTS10Q9H324 1103 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 NCOA3Q9Y6Q9 1424 aa7.35□□□□□ -1.23
GCSHP4-201ENST00000538792 ZNF503-AS2A6NEH8 195 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 UNCXA6NJT0 531 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 MEIS3P2A8K0S8 358 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 TMEM132EQ6IEE7 984 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 TTC6Q86TZ1 520 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 MRRFQ96E11 262 aaKnown RBP7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 KIAA1522Q9P206 1035 aaPredicted RBP7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 DDX41Q9UJV9 622 aaKnown RBP7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 PCDHA11Q9Y5I1 949 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 NALCNQ8IZF0 1738 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 NRXN1Q9ULB1 1477 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 PIK3C2GO75747 1445 aa7.34□□□□□ -1.23
GCSHP4-201ENST00000538792 MSH6P52701 1360 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 DHX57Q6P158 1386 aaKnown RBP7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 SCAMP3O14828 347 aaKnown RBP7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 NME1P15531 152 aaKnown RBP7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 AFMP43652 599 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 ERVFC1P60507 584 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 EGR3Q06889 387 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 SNW1Q13573 536 aaKnown RBP7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 NBPF12Q5TAG4 269 aaPredicted RBP7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 TMEM192Q8IY95 271 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 POU5F2Q8N7G0 328 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 RGS22Q8NE09 1264 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 ZNF512BQ96KM6 892 aaPredicted RBP7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 TMEM59LQ9UK28 342 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 PRAG1Q86YV5 1406 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 PLEKHH1Q9ULM0 1364 aa7.33□□□□□ -1.24
GCSHP4-201ENST00000538792 HK2P52789 917 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 LCE3BQ5TA77 95 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 TMC3Q7Z5M5 1100 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 KIRREL1Q96J84 757 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 SLC9A7Q96T83 725 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 ZNRF3Q9ULT6 936 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 MST1RQ04912 1400 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 PTCH1Q13635 1447 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 MED1Q15648 1581 aaPredicted RBP7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 DISP3Q9P2K9 1392 aa7.32□□□□□ -1.24
GCSHP4-201ENST00000538792 TNFRSF10CO14798 259 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 ACRP10323 421 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 ZNF648Q5T619 568 aaPredicted RBP7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 BRINP3Q76B58 766 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 WAPLQ7Z5K2 1190 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 DDX17Q92841 729 aaKnown RBP7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 LIN37Q96GY3 246 aaPredicted RBP7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 HDAC8Q9BY41 377 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 C14orf93Q9H972 538 aaKnown RBP7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 ADGRL3Q9HAR2 1447 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 SP110Q9HB58 689 aa7.31□□□□□ -1.24
GCSHP4-201ENST00000538792 COL16A1Q07092 1604 aaPredicted RBP7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 MYOM2P54296 1465 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 TECPR2O15040 1411 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 FAM86C2PA6NEL3 165 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 ZGLP1P0C6A0 271 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 CHMP4BP1P59074 171 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 RNF4P78317 190 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 TEKQ02763 1124 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 NMIQ13287 307 aaPredicted RBP7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 LRRFIP1Q32MZ4 808 aaKnown RBP7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 C9orf131Q5VYM1 1079 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 SLC6A18Q96N87 628 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 STK26Q9P289 416 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 RGS17Q9UGC6 210 aaPredicted RBP7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 EBF1Q9UH73 591 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 PPT2Q9UMR5 302 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 MINPP1Q9UNW1 487 aa7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 LRPPRCP42704 1394 aaKnown RBP7.3□□□□□ -1.24
GCSHP4-201ENST00000538792 ADGRB1O14514 1584 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 DCCP43146 1447 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 YTHDC2Q9H6S0 1430 aaKnown RBP7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 CLEC3AO75596 197 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 GLI1P08151 1106 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 TRHRP34981 398 aaPredicted RBP7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 PAK2Q13177 524 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 CLEC16AQ2KHT3 1053 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 AHDC1Q5TGY3 1603 aaPredicted RBP7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 ABCC11Q96J66 1382 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 PHLPP1O60346 1717 aa7.29□□□□□ -1.24
GCSHP4-201ENST00000538792 KNDC1Q76NI1 1749 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms