RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 EPHB4P54760 987 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 TRAF1Q13077 416 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 EMBQ6PCB8 327 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 MMGT1Q8N4V1 131 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 CAGE1Q8TC20 777 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 JAKMIP2Q96AA8 810 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 SEMA3EO15041 775 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 SNUPNO95149 360 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 GUCY1A3Q02108 690 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 LPIN2Q92539 896 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 GJB4Q9NTQ9 266 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 REXO2Q9Y3B8 237 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 MGRN1O60291 552 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 MCAMP43121 646 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 ZAP70P43403 619 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 APBA1Q02410 837 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 CDKAL1Q5VV42 579 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 SH2D3CQ8N5H7 860 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 KBTBD3Q8NAB2 608 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 DSCC1Q9BVC3 393 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 EPN1Q9Y6I3 576 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-221ENST00000537934 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 PDE2AO00408 941 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 NDUFA10O95299 355 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 XRCC4Q13426 336 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 RASSF8Q8NHQ8 419 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 BORCS6Q96GS4 357 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 MDH1P40925 334 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 C2orf54Q08AI8 447 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 TRIM14Q14142 442 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 SPECC1Q5M775 1068 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 ZNF662Q6ZS27 426 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
SEMA4D-221ENST00000537934 DNM1LO00429 736 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 SEC24CP53992 1094 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 ANKRD20A8PQ5CZ79 823 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 OR8K1Q8NGG5 319 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 TCP11Q8WWU5 503 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 ZIM3Q96PE6 472 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 SLC5A1P13866 664 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 NR1D1P20393 614 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 ITIH3Q06033 890 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 VPS37DQ86XT2 251 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 C1orf131Q8NDD1 294 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 SPATA20Q8TB22 786 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 OSBPL7Q9BZF2 842 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 EBF2Q9HAK2 575 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 A0A1B0GUL6 1792 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 RGPD3A6NKT7 1758 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 RGPD4Q7Z3J3 1758 aa12.62□□□□□ -0.39
SEMA4D-221ENST00000537934 AP1G2O75843 785 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 IPO7O95373 1038 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 BCAMP50895 628 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 KCNB1Q14721 858 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 ZC3H12AQ5D1E8 599 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 KRI1Q8N9T8 703 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 AIDAQ96BJ3 306 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 ARAP2Q8WZ64 1704 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 E7EVH7 732 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 CPLX1O14810 134 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 ZNF185O15231 689 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 CLSTN1O94985 981 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 TNFRSF8P28908 595 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 ACCSLQ4AC99 568 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 CCDC122Q5T0U0 273 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 KANK3Q6NY19 840 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 ZNF572Q7Z3I7 529 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 SERTAD1Q9UHV2 236 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 DMGDHQ9UI17 866 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 SYNRGQ9UMZ2 1314 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 KRT14P02533 472 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms