RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 ZNF862O60290 1169 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 TIAF1O95411 115 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 ECEL1O95672 775 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 DLGAP3O95886 979 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 PF4P02776 101 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
CCDC60-203ENST00000536742 LRP8Q14114 963 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 SNAP47Q5SQN1 464 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 RAPGEFL1Q9UHV5 662 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 TLR6Q9Y2C9 796 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 HIF3AQ9Y2N7 669 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 SNCAIPQ9Y6H5 919 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 SCN11AQ9UI33 1791 aa9.06□□□□□ -0.96
CCDC60-203ENST00000536742 FZD9O00144 591 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 FSTP19883 344 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ERCC5P28715 1186 aaPredicted RBP9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ID3Q02535 119 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 SOX4Q06945 474 aaPredicted RBP9.05□□□□□ -0.96
CCDC60-203ENST00000536742 KIAA0825Q8IV33 1275 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 DEFB123Q8N688 67 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 GATAD2BQ8WXI9 593 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
CCDC60-203ENST00000536742 PRO3102Q9H379 93 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ATXN3LQ9H3M9 355 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ZNF408Q9H9D4 720 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 TMOD3Q9NYL9 352 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 STOML1Q9UBI4 398 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 SRP68Q9UHB9 627 aaKnown RBP9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ASAP1Q9ULH1 1129 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.05□□□□□ -0.96
CCDC60-203ENST00000536742 RAXQ9Y2V3 346 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
CCDC60-203ENST00000536742 RANBP2P49792 3224 aaKnown RBP9.05□□□□□ -0.96
CCDC60-203ENST00000536742 ZNF831Q5JPB2 1677 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 MINDY4BA8MYZ0 360 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 DHX15O43143 795 aaKnown RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 GREM1O60565 184 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 ADH5P11766 374 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 LIG1P18858 919 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 ERVK-24P63145 666 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 RPL6Q02878 288 aaKnown RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 HDXQ7Z353 690 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 UBL7Q96S82 380 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 SPON2Q9BUD6 331 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 NT5C1AQ9BXI3 368 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 LRRC3Q9BY71 257 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-203ENST00000536742 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 RNF112Q9ULX5 631 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 PCDHA4Q9UN74 947 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 NRXN2Q9P2S2 1712 aa9.04□□□□□ -0.96
CCDC60-203ENST00000536742 BPNT1O95861 308 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 SERPINB2P05120 415 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 GARTP22102 1010 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 PDE6BP35913 854 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 MPP2Q14168 576 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
CCDC60-203ENST00000536742 UTP4Q969X6 686 aaKnown RBP9.03□□□□□ -0.96
CCDC60-203ENST00000536742 FAM46AQ96IP4 442 aaKnown RBP9.03□□□□□ -0.96
CCDC60-203ENST00000536742 YIPF2Q9BWQ6 316 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 CRIM1Q9NZV1 1036 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
CCDC60-203ENST00000536742 KIAA0100Q14667 2235 aaKnown RBP9.03□□□□□ -0.96
CCDC60-203ENST00000536742 TMPRSS2O15393 492 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 GSC2O15499 205 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 CYP27B1O15528 508 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 HYAL3O43820 417 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-203ENST00000536742 CILPO75339 1184 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 EPS15P42566 896 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 SEPT6Q14141 434 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 ZNF394Q53GI3 561 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-203ENST00000536742 GOLM1Q8NBJ4 401 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 ADAMTS1Q9UHI8 967 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 VCANP13611 3396 aa9.02□□□□□ -0.97
CCDC60-203ENST00000536742 LAMB4A4D0S4 1761 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 KDRP35968 1356 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-203ENST00000536742 FAM221AA4D161 298 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 COL5A3P25940 1745 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-203ENST00000536742 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
CCDC60-203ENST00000536742 RACK1P63244 317 aaKnown RBP9.01□□□□□ -0.97
CCDC60-203ENST00000536742 GNL2Q13823 731 aaKnown RBP9.01□□□□□ -0.97
CCDC60-203ENST00000536742 FBXL19Q6PCT2 694 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 CDC37L1Q7L3B6 337 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 ELMO3Q96BJ8 720 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 WDR89Q96FK6 387 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-203ENST00000536742 ATG3Q9NT62 314 aa9.01□□□□□ -0.97
CCDC60-203ENST00000536742 FANCGO15287 622 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 GAS2O43903 313 aaKnown RBP9□□□□□ -0.97
CCDC60-203ENST00000536742 F13A1P00488 732 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 COL9A2Q14055 689 aaPredicted RBP9□□□□□ -0.97
CCDC60-203ENST00000536742 NFIXQ14938 502 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 CWF19L2Q2TBE0 894 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms