RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 SEC23AQ15436 765 aa16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 NUP133Q8WUM0 1156 aa16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 VTA1Q9NP79 307 aa16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 MAP3K20Q9NYL2 800 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
SCNN1A-209ENST00000536411 PTPDC1A2A3K4 754 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 ZEB2O60315 1214 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 DDAH1O94760 285 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 CALM1P0DP23 149 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 CALM2P0DP24 149 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 CALM3P0DP25 149 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 GNAQP50148 359 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 LRRC41Q15345 812 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 C1orf53Q5VUE5 145 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 LZTS2Q9BRK4 669 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 SENP6Q9GZR1 1112 aaPredicted RBP16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 Q9Y3F1 56 aa16.55■□□□□ 0.24
SCNN1A-209ENST00000536411 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 SNAI1O95863 264 aaPredicted RBP16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 HMGB1P09429 215 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 CST5P28325 142 aaPredicted RBP16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 PRAMEF19Q5SWL8 479 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 CTCFLQ8NI51 663 aaPredicted RBP16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 MORC4Q8TE76 937 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 PHF24Q9UPV7 400 aa16.54■□□□□ 0.24
SCNN1A-209ENST00000536411 CENPFP49454 3210 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 KLRF2D3W0D1 207 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 REC8O95072 547 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 GOLGA8HP0CJ92 632 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 SMARCA1P28370 1054 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 GRM4Q14833 912 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 MUM1L1Q5H9M0 696 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 RASGRP2Q7LDG7 609 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 C7orf61Q8IZ16 206 aa16.53■□□□□ 0.24
SCNN1A-209ENST00000536411 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 SLC27A2O14975 620 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 ZBTB5O15062 677 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 NKRFO15226 690 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 CABYRO75952 493 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 MYCNP04198 464 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 LIFRP42702 1097 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 ALDH5A1P51649 535 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 BAATQ14032 418 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 NECTIN1Q15223 517 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 CCDC144BQ3MJ40 725 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 BRDTQ58F21 947 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 GJC2Q5T442 439 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 CREB3L3Q68CJ9 461 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.24
SCNN1A-209ENST00000536411 SYNRGQ9UMZ2 1314 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 NFIBO00712 420 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 GJA9P57773 515 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 SNAP25P60880 206 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 RPS6P62753 249 aaKnown RBP16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 NKX3-2P78367 333 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 PDE4DQ08499 809 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 SNX17Q15036 470 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 QRICH1Q2TAL8 776 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 USH1GQ495M9 461 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 FGD4Q96M96 766 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 GLT1D1Q96MS3 346 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 AP5M1Q9H0R1 490 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 MAD2L2Q9UI95 211 aa16.51■□□□□ 0.23
SCNN1A-209ENST00000536411 ELP1O95163 1332 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 PRC1O43663 620 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 ADAMTS4O75173 837 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 CALML3P27482 149 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 BMP8BP34820 402 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 TROAPQ12815 778 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 TSGA10IPQ3SY00 556 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 ANO1Q5XXA6 986 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 SLC39A5Q6ZMH5 540 aa16.5■□□□□ 0.23
SCNN1A-209ENST00000536411 IGDCC4Q8TDY8 1250 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms