RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CALM1P0DP23 149 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CALM2P0DP24 149 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CALM3P0DP25 149 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 KIF5BP33176 963 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CNTN2Q02246 1040 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 KCTD2Q14681 263 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MAP3K21Q5TCX8 1036 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 MAML3Q96JK9 1138 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PIGSQ96S52 555 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ASTN1O14525 1302 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 BRCA2P51587 3418 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ZBTB5O15062 677 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ZBTB43O43298 467 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CAPN15O75808 1086 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CDC27P30260 824 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CYP2C19P33261 490 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 EVCP57679 992 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FGD1P98174 961 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FUT2Q10981 343 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 FBXO11Q86XK2 927 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 ANKRD35Q8N283 1001 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 UNC93B1Q9H1C4 597 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 NID2Q14112 1375 aa13.15□□□□□ -0.3
TNFRSF1A-208ENST00000536194 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 GOLGA8BA8MQT2 603 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 OPLAHO14841 1288 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CCL5P13501 91 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RCAN1P53805 252 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SOX10P56693 466 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 UBXN2AP68543 259 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RTN1Q16799 776 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 KIF2CQ99661 725 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 DIS3Q9Y2L1 958 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PFASO15067 1338 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ABCB11O95342 1321 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 GNAQP50148 359 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PAK6Q9NQU5 681 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PNMA2Q9UL42 364 aa13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 DDX49Q9Y6V7 483 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-208ENST00000536194 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CYBAP13498 195 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ADD1P35611 737 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 METAP2P50579 478 aaKnown RBP eCLIP13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 MAMDC4Q6UXC1 1216 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SHISA4Q96DD7 197 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RNF208Q9H0X6 261 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CALML3P27482 149 aa13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RBM25P49756 843 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 AK2P54819 239 aa13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 NTRK3Q16288 839 aa13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms