RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 PRR12Q9ULL5 1215 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
CHD4-204ENST00000535810 KDM4AO75164 1064 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 SNHG28P0DPA3 235 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 PDHBP11177 359 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 SNAP25P60880 206 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 IER5LQ5T953 404 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 TTBK2Q6IQ55 1244 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 BTNL9Q6UXG8 535 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 FGD4Q96M96 766 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 AGBL1Q96MI9 1066 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 TTC14Q96N46 770 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 ZKSCAN3Q9BRR0 538 aa10.4□□□□□ -0.74
CHD4-204ENST00000535810 SYNGAP1Q96PV0 1343 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 MUC3AQ02505 3323 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 B4E1Z4 1266 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 DNM1LO00429 736 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 SGSM2O43147 1006 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 TAL1P17542 331 aaPredicted RBP10.39□□□□□ -0.75
CHD4-204ENST00000535810 BMP8BP34820 402 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 SLC16A2P36021 539 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 TPRNQ4KMQ1 711 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 ANO1Q5XXA6 986 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 CCDC174Q6PII3 467 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 MAMDC4Q6UXC1 1216 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 IQCA1Q86XH1 822 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 DGKHQ86XP1 1220 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 ANKRD35Q8N283 1001 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 MSL3Q8N5Y2 521 aaKnown RBP10.39□□□□□ -0.75
CHD4-204ENST00000535810 RUFY2Q8WXA3 655 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 ZSCAN10Q96SZ4 725 aaPredicted RBP10.39□□□□□ -0.75
CHD4-204ENST00000535810 RANBP17Q9H2T7 1088 aaKnown RBP10.39□□□□□ -0.75
CHD4-204ENST00000535810 ACAD9Q9H845 621 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 RNF146Q9NTX7 359 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 CNPY2Q9Y2B0 182 aa10.39□□□□□ -0.75
CHD4-204ENST00000535810 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
CHD4-204ENST00000535810 ICAM1P05362 532 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 ZNF865P0CJ78 1059 aaPredicted RBP10.38□□□□□ -0.75
CHD4-204ENST00000535810 ALAS1P13196 640 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 PTH1RQ03431 593 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 E2F4Q16254 413 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 TKFCQ3LXA3 575 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 CCDC178Q5BJE1 867 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 CENPQQ7L2Z9 268 aaPredicted RBP10.38□□□□□ -0.75
CHD4-204ENST00000535810 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD4-204ENST00000535810 C7orf61Q8IZ16 206 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 ENAHQ8N8S7 591 aaPredicted RBP10.38□□□□□ -0.75
CHD4-204ENST00000535810 FAM133AQ8N9E0 248 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 TRERF1Q96PN7 1200 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 KRT23Q9C075 422 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 CNNM2Q9H8M5 875 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
CHD4-204ENST00000535810 PRDM6Q9NQX0 595 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 MTMR10Q9NXD2 777 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 ZSWIM5Q9P217 1185 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 CCPG1Q9ULG6 757 aa10.38□□□□□ -0.75
CHD4-204ENST00000535810 TNKSO95271 1327 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 CYP21A2P08686 494 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 RARBP10826 455 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 AKR1A1P14550 325 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 LRRC26Q2I0M4 334 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 LRIT3Q3SXY7 679 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 GJC2Q5T442 439 aaPredicted RBP10.37□□□□□ -0.75
CHD4-204ENST00000535810 SKAP1Q86WV1 359 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 ARRDC4Q8NCT1 418 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
CHD4-204ENST00000535810 LENG1Q96BZ8 264 aaPredicted RBP10.37□□□□□ -0.75
CHD4-204ENST00000535810 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
CHD4-204ENST00000535810 ZHX1Q9UKY1 873 aaPredicted RBP10.37□□□□□ -0.75
CHD4-204ENST00000535810 SMCHD1A6NHR9 2005 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 ASTN1O14525 1302 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 MCM3APO60318 1980 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 SEC24BO95487 1268 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 GOLGA8HP0CJ92 632 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 LRRC41Q15345 812 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
CHD4-204ENST00000535810 Q7L0L9 218 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 ARMCX2Q7L311 632 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 CCDC144CPQ8IYA2 1237 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 GDF15Q99988 308 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 UBAC1Q9BSL1 405 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 SENP6Q9GZR1 1112 aaPredicted RBP10.36□□□□□ -0.75
CHD4-204ENST00000535810 CPVLQ9H3G5 476 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 KAT14Q9H8E8 782 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 XPNPEP3Q9NQH7 507 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
CHD4-204ENST00000535810 CYP39A1Q9NYL5 469 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 ZMYND8Q9ULU4 1186 aaPredicted RBP10.36□□□□□ -0.75
CHD4-204ENST00000535810 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
CHD4-204ENST00000535810 LAMA2P24043 3122 aaKnown RBP10.36□□□□□ -0.75
CHD4-204ENST00000535810 WDR19Q8NEZ3 1342 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms