RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 ZHX1Q9UKY1 873 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-204ENST00000535406 PNMA2Q9UL42 364 aa11.06□□□□□ -0.64
CDCA3-204ENST00000535406 CEP290O15078 2479 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 SNAI1O95863 264 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-204ENST00000535406 NEFLP07196 543 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-204ENST00000535406 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 ASPRV1Q53RT3 343 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 GJC2Q5T442 439 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-204ENST00000535406 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 ARMCX2Q7L311 632 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 NCOA7Q8NI08 942 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 MAP4K1Q92918 833 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 FGD4Q96M96 766 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 SENP6Q9GZR1 1112 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-204ENST00000535406 XPNPEP3Q9NQH7 507 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-204ENST00000535406 CYP39A1Q9NYL5 469 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 RBM8AQ9Y5S9 174 aaKnown RBP11.05□□□□□ -0.64
CDCA3-204ENST00000535406 LRRC37A2A6NM11 1700 aa11.05□□□□□ -0.64
CDCA3-204ENST00000535406 DNAH12Q6ZR08 3092 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 LCTP09848 1927 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 ERICH2A1L162 156 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 E7EWF7 191 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 PARP1P09874 1014 aaKnown RBP11.04□□□□□ -0.64
CDCA3-204ENST00000535406 CNTN2Q02246 1040 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 SART3Q15020 963 aaKnown RBP11.04□□□□□ -0.64
CDCA3-204ENST00000535406 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 CYB5R4Q7L1T6 521 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 CCDC144CPQ8IYA2 1237 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 LENG1Q96BZ8 264 aaPredicted RBP11.04□□□□□ -0.64
CDCA3-204ENST00000535406 ESYT1Q9BSJ8 1104 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
CDCA3-204ENST00000535406 SMCHD1A6NHR9 2005 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 ASB14A6NK59 587 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 NFIBO00712 420 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
CDCA3-204ENST00000535406 DHX16O60231 1041 aaKnown RBP11.03□□□□□ -0.64
CDCA3-204ENST00000535406 ACVR2BQ13705 512 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 LRRC41Q15345 812 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 SEC23AQ15436 765 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
CDCA3-204ENST00000535406 LRRC26Q2I0M4 334 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 USH1GQ495M9 461 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 RNF180Q86T96 592 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 UBA5Q9GZZ9 404 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
CDCA3-204ENST00000535406 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 ANO2Q9NQ90 1003 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
CDCA3-204ENST00000535406 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
CDCA3-204ENST00000535406 MYH6P13533 1939 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 SYNRGQ9UMZ2 1314 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 PTPDC1A2A3K4 754 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 PGK1P00558 417 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 ATN1P54259 1190 aaPredicted RBP11.02□□□□□ -0.65
CDCA3-204ENST00000535406 BAATQ14032 418 aaPredicted RBP11.02□□□□□ -0.65
CDCA3-204ENST00000535406 WTAPQ15007 396 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 HABP4Q5JVS0 413 aaKnown RBP11.02□□□□□ -0.65
CDCA3-204ENST00000535406 SLC30A10Q6XR72 485 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 ADGRF4Q8IZF3 695 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 WDR70Q9NW82 654 aa11.02□□□□□ -0.65
CDCA3-204ENST00000535406 ZMYND8Q9ULU4 1186 aaPredicted RBP11.02□□□□□ -0.65
CDCA3-204ENST00000535406 RANBP2P49792 3224 aaKnown RBP11.01□□□□□ -0.65
CDCA3-204ENST00000535406 ASTN1O14525 1302 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 ADAMTS4O75173 837 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 DUSP11O75319 330 aaKnown RBP11.01□□□□□ -0.65
CDCA3-204ENST00000535406 CDC45O75419 566 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 SYN1P17600 705 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 RNF207Q6ZRF8 634 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 MB21D2Q8IYB1 491 aaPredicted RBP11.01□□□□□ -0.65
CDCA3-204ENST00000535406 CLEC4DQ8WXI8 215 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
CDCA3-204ENST00000535406 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
CDCA3-204ENST00000535406 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
CDCA3-204ENST00000535406 ABCB11O95342 1321 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 LOC102724159A0A0B4J2E5 919 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 KLRF2D3W0D1 207 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 SLC27A2O14975 620 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 ADCY6O43306 1168 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 CALML3P27482 149 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 ADCYAP1R1P41586 468 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 ALDH5A1P51649 535 aaPredicted RBP11□□□□□ -0.65
CDCA3-204ENST00000535406 ANTXR2P58335 489 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 RTP1P59025 263 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 PWP2Q15269 919 aaKnown RBP11□□□□□ -0.65
CDCA3-204ENST00000535406 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 TMEM67Q5HYA8 995 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 CREB3L3Q68CJ9 461 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms