RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SRGAP1Q7Z6B7 1085 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 TMTC1Q8IUR5 882 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 SULF1Q8IWU6 871 aa13.85□□□□□ -0.19
SPG11-203ENST00000535302 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
SPG11-203ENST00000535302 ANKRD20A3Q5VUR7 823 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 PI16Q6UXB8 463 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 SMYD4Q8IYR2 804 aaPredicted RBP13.84□□□□□ -0.19
SPG11-203ENST00000535302 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
SPG11-203ENST00000535302 NDUFA8P51970 172 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 RCN2Q14257 317 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 PLA2G4DQ86XP0 818 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 CCPG1Q9ULG6 757 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 HOXB7P09629 217 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 STX2P32856 288 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 ADCY8P40145 1251 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 SNX1Q13596 522 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 ATICP31939 592 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 DDX41Q9UJV9 622 aaKnown RBP13.84□□□□□ -0.19
SPG11-203ENST00000535302 ERVV-2B6SEH9 535 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 STK25O00506 426 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 SCRN1Q12765 414 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 ERFEQ4G0M1 354 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 ANKRD13CQ8N6S4 541 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 TBC1D22AQ8WUA7 517 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 GLT8D2Q9H1C3 349 aa13.84□□□□□ -0.19
SPG11-203ENST00000535302 POC1B-GALNT4F8VUJ3 575 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 STAM2O75886 525 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 ADCK5Q3MIX3 580 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 PPP4R1Q8TF05 950 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 CHURC1Q8WUH1 139 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 GJA10Q969M2 543 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 NUCKS1Q9H1E3 243 aaKnown RBP13.83□□□□□ -0.19
SPG11-203ENST00000535302 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 CD2APQ9Y5K6 639 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 PZPP20742 1482 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 ZBBXA8MT70 800 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 LRRC41Q15345 812 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 PPM1KQ8N3J5 372 aa13.83□□□□□ -0.19
SPG11-203ENST00000535302 FAM193BQ96PV7 902 aaPredicted RBP13.83□□□□□ -0.19
SPG11-203ENST00000535302 PRKAB2O43741 272 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 EEPD1Q7L9B9 569 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
SPG11-203ENST00000535302 WDR62O43379 1518 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 BAG6P46379 1132 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 CFAP221Q4G0U5 840 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 VCXQ9H320 206 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
SPG11-203ENST00000535302 SLFN13Q68D06 897 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 TSR3Q9UJK0 312 aaKnown RBP13.83□□□□□ -0.2
SPG11-203ENST00000535302 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 ADCY9O60503 1353 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 MEIS1O00470 390 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 MGEA5O60502 916 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 DCPSQ96C86 337 aaKnown RBP13.83□□□□□ -0.2
SPG11-203ENST00000535302 DISC1Q9NRI5 854 aa13.83□□□□□ -0.2
SPG11-203ENST00000535302 CDR2Q01850 454 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 TSNAXIP1Q2TAA8 658 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 SEPT9Q9UHD8 586 aaPredicted RBP13.82□□□□□ -0.2
SPG11-203ENST00000535302 NUB1Q9Y5A7 615 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 SCG2P13521 617 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 POLGP54098 1239 aaPredicted RBP13.82□□□□□ -0.2
SPG11-203ENST00000535302 FANCLQ9NW38 375 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
SPG11-203ENST00000535302 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 TMOD1P28289 359 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 GBP5Q96PP8 586 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 UBN1Q9NPG3 1134 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 RAB20Q9NX57 234 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 OR52Z1P0C646 297 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 GNPTABQ3T906 1256 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 NEK8Q86SG6 692 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 NT5C3AQ9H0P0 336 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 RGS16O15492 202 aaPredicted RBP13.82□□□□□ -0.2
SPG11-203ENST00000535302 PIK3CAP42336 1068 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 PTGDRQ13258 359 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 NKX1-1Q15270 411 aaPredicted RBP13.82□□□□□ -0.2
SPG11-203ENST00000535302 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 ZNF804BA4D1E1 1349 aa13.82□□□□□ -0.2
SPG11-203ENST00000535302 CYP2D7A0A087X1C5 515 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 RPN1P04843 607 aaKnown RBP13.81□□□□□ -0.2
SPG11-203ENST00000535302 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 SYCE1Q8N0S2 351 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 TEKT3Q9BXF9 490 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPG11-203ENST00000535302 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms