RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
CSDE1-217ENST00000534699 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 CHMLP26374 656 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 ACLYP53396 1101 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
CSDE1-217ENST00000534699 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 GLT1D1Q96MS3 346 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
CSDE1-217ENST00000534699 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
CSDE1-217ENST00000534699 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 MYH6P13533 1939 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 EDNRBP24530 442 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 PDE4AP27815 886 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 SLC43A3Q8NBI5 491 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 NEDD4P46934 1319 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 A0A1W2PQ45 241 aaPredicted RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 A0A1W2PQY0 241 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 SGSM2O43147 1006 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 CLTBP09497 229 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 CDK7P50613 346 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 CENPQQ7L2Z9 268 aaPredicted RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
CSDE1-217ENST00000534699 ZHX1Q9UKY1 873 aaPredicted RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 GNEQ9Y223 722 aaKnown RBP12.15□□□□□ -0.46
CSDE1-217ENST00000534699 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.47
CSDE1-217ENST00000534699 MCM3APO60318 1980 aa12.15□□□□□ -0.47
CSDE1-217ENST00000534699 ERICH2A1L162 156 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 ALDH5A1P51649 535 aaPredicted RBP12.14□□□□□ -0.47
CSDE1-217ENST00000534699 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 PRAMEF19Q5SWL8 479 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 NMT2O60551 498 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 KDM4AO75164 1064 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 SEC23AQ15436 765 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 CLEC4DQ8WXI8 215 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 STARD7Q9NQZ5 370 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
CSDE1-217ENST00000534699 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
CSDE1-217ENST00000534699 GNAQP50148 359 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 MAP4K1Q92918 833 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 PDLIM7Q9NR12 457 aa12.14□□□□□ -0.47
CSDE1-217ENST00000534699 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 TNKSO95271 1327 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 ARVCFO00192 962 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 CPT1AP50416 773 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 HAND2P61296 217 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 SMAD3P84022 425 aaKnown RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 ENAHQ8N8S7 591 aaPredicted RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 ZMYND8Q9ULU4 1186 aaPredicted RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 EPB41L2O43491 1005 aaKnown RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 TAL1P17542 331 aaPredicted RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 GRM4Q14833 912 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 KCNA10Q16322 511 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
CSDE1-217ENST00000534699 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
CSDE1-217ENST00000534699 B4E1Z4 1266 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 STAM2O75886 525 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 CALM1P0DP23 149 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 CALM2P0DP24 149 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 CALM3P0DP25 149 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 TRIM60Q495X7 471 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 TMEM87BQ96K49 555 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 GPCPD1Q9NPB8 672 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
CSDE1-217ENST00000534699 DDAH1O94760 285 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 PPIGQ13427 754 aaKnown RBP eCLIP12.12□□□□□ -0.476e-6■□□□□ 9.4
CSDE1-217ENST00000534699 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
CSDE1-217ENST00000534699 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 FAM43BQ6ZT52 329 aaPredicted RBP12.12□□□□□ -0.47
CSDE1-217ENST00000534699 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
CSDE1-217ENST00000534699 TIMP1P01033 207 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 CNTN2Q02246 1040 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms