RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 COL20A1Q9P218 1284 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 DDX20Q9UHI6 824 aaKnown RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 CTNNA3Q9UI47 895 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 ISY1Q9ULR0 285 aaKnown RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 DIS3Q9Y2L1 958 aaKnown RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 U3KPZ7 1027 aaPredicted RBP5.95□□□□□ -1.46
USH1C-210ENST00000534556 SIP14410 1827 aa5.95□□□□□ -1.46
USH1C-210ENST00000534556 PALM3A6NDB9 673 aaPredicted RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 SEPT4O43236 478 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 ADAMTS4O75173 837 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 PGK1P00558 417 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 ICAM1P05362 532 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 TROAPQ12815 778 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 IKQ13123 557 aaPredicted RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 BAATQ14032 418 aaPredicted RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 KCTD2Q14681 263 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 GRM4Q14833 912 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 LRRC41Q15345 812 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 QRICH1Q2TAL8 776 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 PRPF38BQ5VTL8 546 aaKnown RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 CCSAPQ6IQ19 270 aaPredicted RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 TAPT1Q6NXT6 567 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 ARMCX2Q7L311 632 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 RAB11FIP4Q86YS3 637 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 CCDC144CPQ8IYA2 1237 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 ANKLE1Q8NAG6 615 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 CHST13Q8NET6 341 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 RUFY2Q8WXA3 655 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 KRT23Q9C075 422 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 ACAD9Q9H845 621 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 VAT1LQ9HCJ6 419 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 CCPG1Q9ULG6 757 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 COLQQ9Y215 455 aaPredicted RBP5.94□□□□□ -1.46
USH1C-210ENST00000534556 MYO9BQ13459 2157 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 EVPLQ92817 2033 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 UNC80Q8N2C7 3258 aa5.94□□□□□ -1.46
USH1C-210ENST00000534556 MYH9P35579 1960 aaKnown RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 KLRF2D3W0D1 207 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 SH2B2O14492 632 aaPredicted RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 IFIT3O14879 490 aaKnown RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 ADAMTS3O15072 1205 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 PRC1O43663 620 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 PLEKHA8P1O95397 391 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 FDX1P10109 184 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 SYN1P17600 705 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 RXRAP19793 462 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 ADCYAP1R1P41586 468 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 RPS6P62753 249 aaKnown RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 EXOSC10Q01780 885 aaKnown RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 ACVR2BQ13705 512 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 CCDC144BQ3MJ40 725 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 USH1GQ495M9 461 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 IFIT1BQ5T764 474 aaKnown RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 NSMFQ6X4W1 530 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 NECAB2Q7Z6G3 386 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 ZNF467Q7Z7K2 595 aaPredicted RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 IQCA1Q86XH1 822 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 CMTR1Q8N1G2 835 aaKnown RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 ANKRD35Q8N283 1001 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 KLHDC9Q8NEP7 349 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 MORC4Q8TE76 937 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 DPF3Q92784 378 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 KCNB2Q92953 911 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 FERMT2Q96AC1 680 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 DDX11Q96FC9 970 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 TAAR1Q96RJ0 339 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 C11orf49Q9H6J7 331 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 RIOX1Q9H6W3 641 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 KAT14Q9H8E8 782 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 CNNM2Q9H8M5 875 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 ANO2Q9NQ90 1003 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 BRPF3Q9ULD4 1205 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 ZMYND8Q9ULU4 1186 aaPredicted RBP5.93□□□□□ -1.46
USH1C-210ENST00000534556 TANC1Q9C0D5 1861 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 GRIN2DO15399 1336 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 WDR19Q8NEZ3 1342 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 SYNGAP1Q96PV0 1343 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 SYNRGQ9UMZ2 1314 aa5.93□□□□□ -1.46
USH1C-210ENST00000534556 hCG_1642624A0A1W2PR95 340 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 POTEB2H3BUK9 544 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 CDC45O75419 566 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 ARIH2O95376 493 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 PARP1P09874 1014 aaKnown RBP5.92□□□□□ -1.46
USH1C-210ENST00000534556 SMPD1P17405 629 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 EDNRBP24530 442 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 ITGB8P26012 769 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 COPB2P35606 906 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 ALDH5A1P51649 535 aaPredicted RBP5.92□□□□□ -1.46
USH1C-210ENST00000534556 ATN1P54259 1190 aaPredicted RBP5.92□□□□□ -1.46
USH1C-210ENST00000534556 BEX3Q00994 111 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 FUT2Q10981 343 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 WTAPQ15007 396 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 CDC37Q16543 378 aaPredicted RBP5.92□□□□□ -1.46
USH1C-210ENST00000534556 TKFCQ3LXA3 575 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 TSGA10IPQ3SY00 556 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 ASPRV1Q53RT3 343 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 TMEM67Q5HYA8 995 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 PPP4R3BQ5MIZ7 849 aa5.92□□□□□ -1.46
USH1C-210ENST00000534556 GPATCH4Q5T3I0 446 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms