RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 ENAHQ8N8S7 591 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-215ENST00000534307 FAM161BQ96MY7 647 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 ZSCAN10Q96SZ4 725 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-215ENST00000534307 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 CCPG1Q9ULG6 757 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 NCOR1O75376 2440 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 ADCY6O43306 1168 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 PGK1P00558 417 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
SF3B2-215ENST00000534307 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
SF3B2-215ENST00000534307 PTH1RQ03431 593 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 ACVR2BQ13705 512 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 CCDC178Q5BJE1 867 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
SF3B2-215ENST00000534307 SLC39A5Q6ZMH5 540 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 KRT23Q9C075 422 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 ZHX1Q9UKY1 873 aaPredicted RBP16.5■□□□□ 0.23
SF3B2-215ENST00000534307 FAM184BQ9ULE4 1060 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
SF3B2-215ENST00000534307 TNKSO95271 1327 aa16.49■□□□□ 0.23
SF3B2-215ENST00000534307 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
SF3B2-215ENST00000534307 ADCYAP1R1P41586 468 aa16.49■□□□□ 0.23
SF3B2-215ENST00000534307 C1orf53Q5VUE5 145 aa16.49■□□□□ 0.23
SF3B2-215ENST00000534307 PRDM6Q9NQX0 595 aa16.49■□□□□ 0.23
SF3B2-215ENST00000534307 WDR19Q8NEZ3 1342 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 NFIBO00712 420 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
SF3B2-215ENST00000534307 CYP21A2P08686 494 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 RTP1P59025 263 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 SEC23AQ15436 765 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 CCSAPQ6IQ19 270 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-215ENST00000534307 RNF180Q86T96 592 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 KLHDC9Q8NEP7 349 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 TAF6LQ9Y6J9 622 aa16.48■□□□□ 0.23
SF3B2-215ENST00000534307 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 CST5P28325 142 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 NKX3-2P78367 333 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 CYB5R4Q7L1T6 521 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 PURBQ96QR8 312 aaKnown RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 TSEN34Q9BSV6 310 aaKnown RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 CPVLQ9H3G5 476 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
SF3B2-215ENST00000534307 DDX49Q9Y6V7 483 aaKnown RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-215ENST00000534307 A0A1W2PQ45 241 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-215ENST00000534307 A0A1W2PQY0 241 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 MYADML2A6NDP7 307 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 ASB14A6NK59 587 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-215ENST00000534307 BAATQ14032 418 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-215ENST00000534307 ASPRV1Q53RT3 343 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 NSMFQ6X4W1 530 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
SF3B2-215ENST00000534307 CTAGE5O15320 804 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 GJA9P57773 515 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 ZNF697Q5TEC3 545 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 SLC30A10Q6XR72 485 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
SF3B2-215ENST00000534307 ATP11BQ9Y2G3 1177 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 BDP1A6H8Y1 2624 aa16.45■□□□□ 0.22
SF3B2-215ENST00000534307 LOC102724159A0A0B4J2E5 919 aa16.44■□□□□ 0.22
SF3B2-215ENST00000534307 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-215ENST00000534307 ACLYP53396 1101 aa16.44■□□□□ 0.22
SF3B2-215ENST00000534307 PWP2Q15269 919 aaKnown RBP16.44■□□□□ 0.22
SF3B2-215ENST00000534307 KCNA10Q16322 511 aa16.44■□□□□ 0.22
SF3B2-215ENST00000534307 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
SF3B2-215ENST00000534307 TAPT1Q6NXT6 567 aa16.44■□□□□ 0.22
SF3B2-215ENST00000534307 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
SF3B2-215ENST00000534307 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
SF3B2-215ENST00000534307 CDX2Q99626 313 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-215ENST00000534307 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
SF3B2-215ENST00000534307 MOXD2PA6NHM9 499 aa16.43■□□□□ 0.22
SF3B2-215ENST00000534307 E7EWF7 191 aa16.43■□□□□ 0.22
SF3B2-215ENST00000534307 ALDH5A1P51649 535 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-215ENST00000534307 CDC37Q16543 378 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-215ENST00000534307 FBXO16Q8IX29 292 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-215ENST00000534307 MAFAQ8NHW3 353 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-215ENST00000534307 PDLIM7Q9NR12 457 aa16.43■□□□□ 0.22
SF3B2-215ENST00000534307 REV3LO60673 3130 aa16.43■□□□□ 0.22
SF3B2-215ENST00000534307 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
SF3B2-215ENST00000534307 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
SF3B2-215ENST00000534307 EDNRBP24530 442 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms