RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.48
UBXN1-217ENST00000534176 MAP3K20Q9NYL2 800 aaKnown RBP18.02■□□□□ 0.48
UBXN1-217ENST00000534176 MOXD2PA6NHM9 499 aa18.01■□□□□ 0.47
UBXN1-217ENST00000534176 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
UBXN1-217ENST00000534176 CDC37Q16543 378 aaPredicted RBP18.01■□□□□ 0.47
UBXN1-217ENST00000534176 PRAMEF19Q5SWL8 479 aa18.01■□□□□ 0.47
UBXN1-217ENST00000534176 RNF207Q6ZRF8 634 aa18.01■□□□□ 0.47
UBXN1-217ENST00000534176 CCDC144CPQ8IYA2 1237 aa18.01■□□□□ 0.47
UBXN1-217ENST00000534176 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
UBXN1-217ENST00000534176 PCSK9Q8NBP7 692 aaKnown RBP18.01■□□□□ 0.47
UBXN1-217ENST00000534176 CHMP4CQ96CF2 233 aa18.01■□□□□ 0.47
UBXN1-217ENST00000534176 SENP6Q9GZR1 1112 aaPredicted RBP18.01■□□□□ 0.47
UBXN1-217ENST00000534176 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
UBXN1-217ENST00000534176 MRPL11Q9Y3B7 192 aaKnown RBP18.01■□□□□ 0.47
UBXN1-217ENST00000534176 PTPDC1A2A3K4 754 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 KLRF2D3W0D1 207 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 CST5P28325 142 aaPredicted RBP18■□□□□ 0.47
UBXN1-217ENST00000534176 KIF5BP33176 963 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 KRT32Q14532 448 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 NECTIN1Q15223 517 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 LRRC41Q15345 812 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 TMEM67Q5HYA8 995 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 CYB5R4Q7L1T6 521 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 RASGRP2Q7LDG7 609 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 MORC4Q8TE76 937 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 NUP133Q8WUM0 1156 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 VTA1Q9NP79 307 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 Q9Y3F1 56 aa18■□□□□ 0.47
UBXN1-217ENST00000534176 PALM3A6NDB9 673 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-217ENST00000534176 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
UBXN1-217ENST00000534176 DDAH1O94760 285 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 GOLGA8HP0CJ92 632 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 CALM1P0DP23 149 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 CALM2P0DP24 149 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 CALM3P0DP25 149 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 SMARCA1P28370 1054 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 LIFRP42702 1097 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 GNAQP50148 359 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 CNTN2Q02246 1040 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 IQSEC1Q6DN90 963 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 MB21D2Q8IYB1 491 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-217ENST00000534176 LZTS2Q9BRK4 669 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 AMNQ9BXJ7 453 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 SEZ6LQ9BYH1 1024 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 PRKAG2Q9UGJ0 569 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 PHF24Q9UPV7 400 aa17.99■□□□□ 0.47
UBXN1-217ENST00000534176 SOWAHBA6NEL2 793 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 SLC27A2O14975 620 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 ZBTB5O15062 677 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
UBXN1-217ENST00000534176 SNAP25P60880 206 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 NKX3-2P78367 333 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 BAATQ14032 418 aaPredicted RBP17.98■□□□□ 0.47
UBXN1-217ENST00000534176 GRM4Q14833 912 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 CCDC144BQ3MJ40 725 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 GJC2Q5T442 439 aaPredicted RBP17.98■□□□□ 0.47
UBXN1-217ENST00000534176 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
UBXN1-217ENST00000534176 FGD4Q96M96 766 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
UBXN1-217ENST00000534176 NFIBO00712 420 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 ZEB2O60315 1214 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 REC8O95072 547 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 ALDH5A1P51649 535 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-217ENST00000534176 GJA9P57773 515 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 TROAPQ12815 778 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 SNX17Q15036 470 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 TSGA10IPQ3SY00 556 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 C7orf61Q8IZ16 206 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 IGDCC4Q8TDY8 1250 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 CLEC4DQ8WXI8 215 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 UPF3AQ9H1J1 476 aaKnown RBP17.97■□□□□ 0.47
UBXN1-217ENST00000534176 JMJD4Q9H9V9 463 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 MROH7Q68CQ1 1323 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 SYNRGQ9UMZ2 1314 aa17.97■□□□□ 0.47
UBXN1-217ENST00000534176 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 NKRFO15226 690 aaKnown RBP eCLIP17.96■□□□□ 0.47
UBXN1-217ENST00000534176 PRC1O43663 620 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 TAL1P17542 331 aaPredicted RBP17.96■□□□□ 0.47
UBXN1-217ENST00000534176 BMP8BP34820 402 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 RPS6P62753 249 aaKnown RBP17.96■□□□□ 0.47
UBXN1-217ENST00000534176 TNFAIP2Q03169 654 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 QRICH1Q2TAL8 776 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 USH1GQ495M9 461 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 SLC39A5Q6ZMH5 540 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 STOX1Q6ZVD7 989 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 MTMR8Q96EF0 704 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 KATNBL1Q9H079 304 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 RIOX1Q9H6W3 641 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 CEP290O15078 2479 aa17.96■□□□□ 0.47
UBXN1-217ENST00000534176 ELP1O95163 1332 aa17.96■□□□□ 0.46
UBXN1-217ENST00000534176 EIF5BO60841 1220 aaKnown RBP17.95■□□□□ 0.46
UBXN1-217ENST00000534176 CABYRO75952 493 aa17.95■□□□□ 0.46
UBXN1-217ENST00000534176 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
UBXN1-217ENST00000534176 CALML3P27482 149 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms