RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 SAMD11Q96NU1 681 aa10.98□□□□□ -0.65
PACS1-213ENST00000533756 TRMT13Q9NUP7 481 aaKnown RBP10.98□□□□□ -0.65
PACS1-213ENST00000533756 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
PACS1-213ENST00000533756 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
PACS1-213ENST00000533756 SIP14410 1827 aa10.98□□□□□ -0.65
PACS1-213ENST00000533756 CHD6Q8TD26 2715 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 H3BNC9 293 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 PSMC6P62333 389 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 TNFAIP2Q03169 654 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 MVPQ14764 893 aaKnown RBP10.97□□□□□ -0.65
PACS1-213ENST00000533756 SEPT2Q15019 361 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
PACS1-213ENST00000533756 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 TMCO2Q7Z6W1 182 aaPredicted RBP10.97□□□□□ -0.65
PACS1-213ENST00000533756 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 C17orf80Q9BSJ5 609 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 AP5M1Q9H0R1 490 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 GNEQ9Y223 722 aaKnown RBP10.97□□□□□ -0.65
PACS1-213ENST00000533756 ASTN1O14525 1302 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
PACS1-213ENST00000533756 NCOR2Q9Y618 2525 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 ATRXP46100 2492 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 COL11A1P12107 1806 aaPredicted RBP10.96□□□□□ -0.65
PACS1-213ENST00000533756 TIMM10P62072 90 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 BFSP2Q13515 415 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 CCDC27Q2M243 656 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
PACS1-213ENST00000533756 TTC6Q86TZ1 520 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.96□□□□□ -0.65
PACS1-213ENST00000533756 KATNBL1Q9H079 304 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 LRP2BPQ9P2M1 347 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
PACS1-213ENST00000533756 ZNF214Q9UL59 606 aaPredicted RBP10.96□□□□□ -0.65
PACS1-213ENST00000533756 Q9Y3F1 56 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 INSL6Q9Y581 213 aa10.96□□□□□ -0.65
PACS1-213ENST00000533756 SCN5AQ14524 2016 aa10.96□□□□□ -0.66
PACS1-213ENST00000533756 ABHD14A-ACY1A0A1B0GW23 586 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 VWA5AO00534 786 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 EFCAB14O75071 495 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 MCAMP43121 646 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 DEFB103AP81534 67 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 GPM6BQ13491 265 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 CLUL1Q15846 466 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 NAA16Q6N069 864 aaPredicted RBP10.95□□□□□ -0.66
PACS1-213ENST00000533756 ARMCX2Q7L311 632 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 TLK2Q86UE8 772 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 XAGE2Q96GT9 111 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 RIPOR3Q96MK2 946 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 CD207Q9UJ71 328 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 PTPRSQ13332 1948 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 VPS13AQ96RL7 3174 aa10.95□□□□□ -0.66
PACS1-213ENST00000533756 DMXL1Q9Y485 3027 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 CDK5RAP2Q96SN8 1893 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 IL16Q14005 1332 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 TPRP12270 2363 aaKnown RBP10.94□□□□□ -0.66
PACS1-213ENST00000533756 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.94□□□□□ -0.66
PACS1-213ENST00000533756 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
PACS1-213ENST00000533756 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
PACS1-213ENST00000533756 IGSF3O75054 1194 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
PACS1-213ENST00000533756 EYA4O95677 639 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 SHMT1P34896 483 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 DLX2Q07687 328 aaPredicted RBP10.94□□□□□ -0.66
PACS1-213ENST00000533756 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 REPS2Q8NFH8 660 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 SH2D4AQ9H788 454 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 ZNF292O60281 2723 aa10.94□□□□□ -0.66
PACS1-213ENST00000533756 ACACBO00763 2458 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 ICAM3P32942 547 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
PACS1-213ENST00000533756 CCDC144CPQ8IYA2 1237 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 TEX13BQ9BXU2 312 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 USP44Q9H0E7 712 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 SEMA4AQ9H3S1 761 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 POLR3EQ9NVU0 708 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 AKAP2Q9Y2D5 859 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 TMX2Q9Y320 296 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 FOCADQ5VW36 1801 aa10.93□□□□□ -0.66
PACS1-213ENST00000533756 HTRA4P83105 476 aaPredicted RBP10.92□□□□□ -0.66
PACS1-213ENST00000533756 PTPN11Q06124 597 aaPredicted RBP10.92□□□□□ -0.66
PACS1-213ENST00000533756 IQSEC1Q6DN90 963 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 PI16Q6UXB8 463 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 CERS3Q8IU89 383 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 KIAA2013Q8IYS2 634 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 AFAP1L1Q8TED9 768 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 FGD4Q96M96 766 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 ARHGEF10LQ9HCE6 1279 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 PPP1R9AQ9ULJ8 1098 aa10.92□□□□□ -0.66
PACS1-213ENST00000533756 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
PACS1-213ENST00000533756 TBX10O75333 385 aa10.91□□□□□ -0.66
PACS1-213ENST00000533756 PDGFBP01127 241 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms