RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 ICAM1P05362 532 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 GJB1P08034 283 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 HOXC6P09630 235 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 SNHG28P0DPA3 235 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 PSEN1P49768 467 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 KRT32Q14532 448 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 TKFCQ3LXA3 575 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 BTNL9Q6UXG8 535 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 MAML3Q96JK9 1138 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 NAP1L2Q9ULW6 460 aaPredicted RBP13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 MCM3APO60318 1980 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 ZNF536O15090 1300 aa13.37□□□□□ -0.27
UBASH3B-208ENST00000533451 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 CENPFP49454 3210 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 PTPDC1A2A3K4 754 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 IER5LQ5T953 404 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 OLFML2BQ68BL8 750 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 RAB11FIP4Q86YS3 637 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 PIBF1Q8WXW3 757 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 MYL10Q9BUA6 226 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 PFASO15067 1338 aa13.36□□□□□ -0.27
UBASH3B-208ENST00000533451 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 FARP2O94887 1054 aaPredicted RBP13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 SGPL1O95470 568 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 GJA8P48165 433 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 GRM4Q14833 912 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 MUM1L1Q5H9M0 696 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 ADGRF4Q8IZF3 695 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 ZNF654Q8IZM8 581 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 PAK6Q9NQU5 681 aaPredicted RBP13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 CNPY2Q9Y2B0 182 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
UBASH3B-208ENST00000533451 RXRAP19793 462 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 CALML3P27482 149 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 KIF5BP33176 963 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 ZNF792Q3KQV3 632 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 PRAMEF19Q5SWL8 479 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 TINF2Q9BSI4 451 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
UBASH3B-208ENST00000533451 NFIBO00712 420 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 DDAH1O94760 285 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 CYBAP13498 195 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 RGS19P49795 217 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 CNTN2Q02246 1040 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 PDAP1Q13442 181 aaKnown RBP13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 COL9A3Q14050 684 aaPredicted RBP13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 QRICH1Q2TAL8 776 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 ANO1Q5XXA6 986 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 FBXO11Q86XK2 927 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 FRMPD3Q5JV73 1810 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
UBASH3B-208ENST00000533451 CPA1P15085 419 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 HSPA4P34932 840 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 RNF207Q6ZRF8 634 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 DHX32Q7L7V1 743 aaKnown RBP13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
UBASH3B-208ENST00000533451 PALM3A6NDB9 673 aaPredicted RBP13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 CALM1P0DP23 149 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 CALM2P0DP24 149 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 CALM3P0DP25 149 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 PSMA5P28066 241 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 LIFRP42702 1097 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 TROAPQ12815 778 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 SLC30A10Q6XR72 485 aa13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
UBASH3B-208ENST00000533451 ARMCX2Q7L311 632 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms