RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CEP89Q96ST8 783 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 MTRQ99707 1265 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
CAPN1-224ENST00000533129 GOLGA8KD6RF30 607 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 ZMYND10O75800 440 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 RPN1P04843 607 aaKnown RBP16.53■□□□□ 0.24
CAPN1-224ENST00000533129 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
CAPN1-224ENST00000533129 ZNF174Q15697 407 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 GSPT2Q8IYD1 628 aaKnown RBP16.53■□□□□ 0.24
CAPN1-224ENST00000533129 GDAP1L1Q96MZ0 367 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
CAPN1-224ENST00000533129 CAPS2Q9BXY5 557 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 FAM169AQ9Y6X4 670 aa16.53■□□□□ 0.24
CAPN1-224ENST00000533129 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
CAPN1-224ENST00000533129 EIF3HO15372 352 aaKnown RBP eCLIP16.52■□□□□ 0.24
CAPN1-224ENST00000533129 ITIH3Q06033 890 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 FUT2Q10981 343 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 PTGDRQ13258 359 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 SEC23AQ15436 765 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 CCDC170Q8IYT3 715 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 PROM2Q8N271 834 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 MYCBPQ99417 103 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-224ENST00000533129 SH3GL2Q99962 352 aa16.52■□□□□ 0.24
CAPN1-224ENST00000533129 SNAP23O00161 211 aa16.52■□□□□ 0.23
CAPN1-224ENST00000533129 PDE2AO00408 941 aaPredicted RBP16.52■□□□□ 0.23
CAPN1-224ENST00000533129 PRCPP42785 496 aa16.52■□□□□ 0.23
CAPN1-224ENST00000533129 RASGRF1Q13972 1273 aa16.52■□□□□ 0.23
CAPN1-224ENST00000533129 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.23
CAPN1-224ENST00000533129 MMGT1Q8N4V1 131 aa16.52■□□□□ 0.23
CAPN1-224ENST00000533129 GRIN2DO15399 1336 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 SHTN1A0MZ66 631 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 IPO7O95373 1038 aaKnown RBP16.51■□□□□ 0.23
CAPN1-224ENST00000533129 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 THAP9Q9H5L6 903 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 TNKSO95271 1327 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 ATXN2Q99700 1313 aaKnown RBP16.51■□□□□ 0.23
CAPN1-224ENST00000533129 A6NNZ2 444 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 PRKAB2O43741 272 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 TUBB8Q3ZCM7 444 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 ADSSL1Q8N142 457 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 TFR2Q9UP52 801 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
CAPN1-224ENST00000533129 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 IDEP14735 1019 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 TM4SF1P30408 202 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 TRAPPC10P48553 1259 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 DNM2P50570 870 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 LCORLQ8N3X6 602 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 BCAS4Q8TDM0 211 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 LACRTQ9GZZ8 138 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 OPA1O60313 960 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
CAPN1-224ENST00000533129 BCAMP50895 628 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 C2orf54Q08AI8 447 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 NPY5RQ15761 445 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 KAT2BQ92831 832 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 TTYH3Q9C0H2 523 aa16.5■□□□□ 0.23
CAPN1-224ENST00000533129 RBM28Q9NW13 759 aaKnown RBP16.5■□□□□ 0.23
CAPN1-224ENST00000533129 ZNHIT6Q9NWK9 470 aaKnown RBP16.5■□□□□ 0.23
CAPN1-224ENST00000533129 ZNF185O15231 689 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 PRDM1O75626 825 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 APBA3O96018 575 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 LIG3P49916 1009 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 PRR5LQ6MZQ0 368 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 TAF1P21675 1872 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 RCCD1A6NED2 376 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 SRGNP10124 158 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 USP8P40818 1118 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 PPARAQ07869 468 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-224ENST00000533129 SND1Q7KZF4 910 aaKnown RBP eCLIP16.49■□□□□ 0.23
CAPN1-224ENST00000533129 ESR2Q92731 530 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 NHEJ1Q9H9Q4 299 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-224ENST00000533129 JADE2Q9NQC1 790 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 GNGT1P63211 74 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 SKOR1P84550 965 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 SKIDA1Q1XH10 827 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 NOC3LQ8WTT2 800 aaKnown RBP16.49■□□□□ 0.23
CAPN1-224ENST00000533129 SNX12Q9UMY4 172 aa16.49■□□□□ 0.23
CAPN1-224ENST00000533129 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-224ENST00000533129 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 SERPINB2P05120 415 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 CDK17Q00537 523 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 CREG2Q8IUH2 290 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 SECISBP2LQ93073 1101 aaKnown RBP16.48■□□□□ 0.23
CAPN1-224ENST00000533129 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-224ENST00000533129 MAPK8IP1Q9UQF2 711 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 PRLRP16471 622 aa16.48■□□□□ 0.23
CAPN1-224ENST00000533129 VAV2P52735 878 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms