RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
CMTM1-216ENST00000533078 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
CMTM1-216ENST00000533078 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
CMTM1-216ENST00000533078 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
CMTM1-216ENST00000533078 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
CMTM1-216ENST00000533078 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
CMTM1-216ENST00000533078 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
CMTM1-216ENST00000533078 ADCY6O43306 1168 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 ALAS1P13196 640 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 NKX3-2P78367 333 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
CMTM1-216ENST00000533078 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 FAM133AQ8N9E0 248 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 NAPBQ9H115 298 aa13.72□□□□□ -0.21
CMTM1-216ENST00000533078 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
CMTM1-216ENST00000533078 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-216ENST00000533078 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
CMTM1-216ENST00000533078 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-216ENST00000533078 PFKMP08237 780 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 CCL23P55773 120 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
CMTM1-216ENST00000533078 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-216ENST00000533078 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 STAG1Q8WVM7 1258 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 GMCL1Q96IK5 515 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 FGD4Q96M96 766 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 KATNBL1Q9H079 304 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-216ENST00000533078 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 Q9Y3F1 56 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 PCDHA11Q9Y5I1 949 aa13.71□□□□□ -0.21
CMTM1-216ENST00000533078 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
CMTM1-216ENST00000533078 ACTN1P12814 892 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 TFAP4Q01664 338 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 AGBL1Q96MI9 1066 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
CMTM1-216ENST00000533078 NOC4LQ9BVI4 516 aaKnown RBP13.7□□□□□ -0.22
CMTM1-216ENST00000533078 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
CMTM1-216ENST00000533078 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
CMTM1-216ENST00000533078 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
CMTM1-216ENST00000533078 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
CMTM1-216ENST00000533078 RAD50Q92878 1312 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 ERC2O15083 957 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 CTAGE5O15320 804 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 B4GALT4O60513 344 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 PLA2G6O60733 806 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 ATP2A2P16615 1042 aaKnown RBP13.69□□□□□ -0.22
CMTM1-216ENST00000533078 MCCP23508 829 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 CPT1AP50416 773 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 EEPD1Q7L9B9 569 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
CMTM1-216ENST00000533078 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 TRPV6Q9H1D0 765 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
CMTM1-216ENST00000533078 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
CMTM1-216ENST00000533078 ASTN1O14525 1302 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 BDP1A6H8Y1 2624 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 SMPD1P17405 629 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 ALDH8A1Q9H2A2 487 aaPredicted RBP13.68□□□□□ -0.22
CMTM1-216ENST00000533078 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 YBX2Q9Y2T7 364 aaKnown RBP13.68□□□□□ -0.22
CMTM1-216ENST00000533078 TRANK1O15050 2925 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 REV3LO60673 3130 aa13.68□□□□□ -0.22
CMTM1-216ENST00000533078 GBF1Q92538 1859 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 UMODL1Q5DID0 1318 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 M0R2C6 588 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 RFC2P35250 354 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 RABGGTBP53611 331 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 PSMC6P62333 389 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 PPARAQ07869 468 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
CMTM1-216ENST00000533078 CCDC96Q2M329 555 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 RCSD1Q6JBY9 416 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 KCTD1Q719H9 257 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 FAM122AQ96E09 287 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 MTMR7Q9Y216 660 aa13.67□□□□□ -0.22
CMTM1-216ENST00000533078 ZNF536O15090 1300 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms