RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 PRPF3O43395 683 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 PRMT2P55345 433 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 CTU1Q7Z7A3 348 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 ABRAQ8N0Z2 381 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 ANKRD35Q8N283 1001 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 PHKBQ93100 1093 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 DDX11Q96FC9 970 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 MMP19Q99542 508 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 SRRDQ9UH36 339 aa12.99□□□□□ -0.33
TRAPPC4-211ENST00000533012 RLFQ13129 1914 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 PPP1R11O60927 126 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 LARGE1O95461 756 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 FLT3LGP49771 235 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 CAP1Q01518 475 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 MUM1L1Q5H9M0 696 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 MORN1Q5T089 497 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 OTOP1Q7RTM1 612 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 DPP9Q86TI2 863 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 MAF1Q9H063 256 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 SLC5A4Q9NY91 659 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
TRAPPC4-211ENST00000533012 TAL1P17542 331 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 ADORA2AP29274 412 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 RGS2P41220 211 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 PRKCZQ05513 592 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 MAP2K5Q13163 448 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 GRB14Q14449 540 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 NSMFQ6X4W1 530 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 HEATR3Q7Z4Q2 680 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 RGS22Q8NE09 1264 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 CLEC4DQ8WXI8 215 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 TMX3Q96JJ7 454 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 GABRQQ9UN88 632 aa12.97□□□□□ -0.33
TRAPPC4-211ENST00000533012 PFASO15067 1338 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 NFIBO00712 420 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 DEXIO95424 95 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 SCG2P13521 617 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 CYP2B6P20813 491 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 IRF5Q13568 498 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 SAMD3Q8N6K7 520 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 RAET1EQ8TD07 263 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 A1CFQ9NQ94 594 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 MAP3K20Q9NYL2 800 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
TRAPPC4-211ENST00000533012 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 COBLO75128 1261 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 CFBP00751 764 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 PGK2P07205 417 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 XRCC5P13010 732 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 NAPAP54920 295 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 BAATQ14032 418 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 PKN1Q16512 942 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 CCDC12Q8WUD4 166 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 WASF1Q92558 559 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 USP6NLQ92738 828 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 SNX21Q969T3 373 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-211ENST00000533012 A0A0G2JMZ2 1700 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 HOXC6P09630 235 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 CALML3P27482 149 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 RPS6P62753 249 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 ZNF792Q3KQV3 632 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 CUL5Q93034 780 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
TRAPPC4-211ENST00000533012 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 PARP14Q460N5 1801 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
TRAPPC4-211ENST00000533012 STXBP3O00186 592 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms