RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	VTI1A	Q96AJ9	217 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	GLT1D1	Q96MS3	346 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SEC62	Q99442	399 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TSEN34	Q9BSV6	310 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ABHD16B	Q9H3Z7	469 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	ACAD9	Q9H845	621 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SLC38A10	Q9HBR0	1119 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PDLIM7	Q9NR12	457 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MTMR10	Q9NXD2	777 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	RIPK3	Q9Y572	518 aa		11.41	□□□□□ -0.58
PPFIA1-223	ENST00000532793	SYNRG	Q9UMZ2	1314 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	DLL1	O00548	723 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	RANBP6	O60518	1105 aa	Known RBP	11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	DUSP11	O75319	330 aa	Known RBP	11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TAL1	P17542	331 aa	Predicted RBP	11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TLE2	Q04725	743 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MAMDC4	Q6UXC1	1216 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	NOL8	Q76FK4	1167 aa	Known RBP	11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	EVI5L	Q96CN4	794 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	FAM161B	Q96MY7	647 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	TMEM39A	Q9NV64	488 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	MTMR7	Q9Y216	660 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	PCDHB15	Q9Y5E8	787 aa		11.4	□□□□□ -0.58
PPFIA1-223	ENST00000532793	DNAJC25-GNG10	A0A024R161	153 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ADAMTS4	O75173	837 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ACLY	P53396	1101 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	RRP1	P56182	461 aa	Known RBP	11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	FPGS	Q05932	587 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ACVR2B	Q13705	512 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	SHH	Q15465	462 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CCDC96	Q2M329	555 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TKFC	Q3LXA3	575 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ARMCX2	Q7L311	632 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	STAG1	Q8WVM7	1258 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	LENG1	Q96BZ8	264 aa	Predicted RBP	11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CHMP4C	Q96CF2	233 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	GMCL1	Q96IK5	515 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	RNPC3	Q96LT9	517 aa	Known RBP	11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	RNF146	Q9NTX7	359 aa		11.39	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ASB14	A6NK59	587 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TLR3	O15455	904 aa	Known RBP	11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	SNAI1	O95863	264 aa	Predicted RBP	11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ALAS1	P13196	640 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	MCC	P23508	829 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CTDSPL2	Q05D32	466 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	KCNA10	Q16322	511 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CCDC144B	Q3MJ40	725 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	RRP12	Q5JTH9	1297 aa	Known RBP	11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CCDC174	Q6PII3	467 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CCDC129	Q6ZRS4	1044 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	SH3RF1	Q7Z6J0	888 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CCDC144CP	Q8IYA2	1237 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TMC2	Q8TDI7	906 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	HELLS	Q9NRZ9	838 aa		11.38	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TRIM43B	A6NCK2	446 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TRIM6-TRIM34	B2RNG4	842 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	KIAA0355	O15063	1070 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ZEB2	O60315	1214 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ASGR1	P07306	291 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CST5	P28325	142 aa	Predicted RBP	11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	GNAS	Q5JWF2	1037 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	C9orf50	Q5SZB4	431 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	RCSD1	Q6JBY9	416 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	KCTD1	Q719H9	257 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TOX2	Q96NM4	488 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TRERF1	Q96PN7	1200 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CCPG1	Q9ULG6	757 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	LRRC37A2	A6NM11	1700 aa		11.37	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ELP1	O95163	1332 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793		A0A0U1RQG5	324 aa	Predicted RBP	11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	PLA2G6	O60733	806 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	MFAP1	P55081	439 aa	Known RBP	11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	SMAD3	P84022	425 aa	Known RBP	11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TNFAIP2	Q03169	654 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	MCMDC2	Q4G0Z9	681 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TRAF7	Q6Q0C0	670 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	NSMF	Q6X4W1	530 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	ANKRD33	Q7Z3H0	272 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	KLHDC9	Q8NEP7	349 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	DCAF4	Q8WV16	495 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	WNT2B	Q93097	391 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	AGBL1	Q96MI9	1066 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CRBN	Q96SW2	442 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	MPHOSPH6	Q99547	160 aa	Known RBP	11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	AP5M1	Q9H0R1	490 aa		11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	A1CF	Q9NQ94	594 aa	Known RBP	11.36	□□□□□ -0.59
PPFIA1-223	ENST00000532793	MYH6	P13533	1939 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	PDE1A	P54750	535 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	GJA9	P57773	515 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	CNTN2	Q02246	1040 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	FAAP100	Q0VG06	881 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	PPIG	Q13427	754 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TLK2	Q86UE8	772 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	TMEM199	Q8N511	208 aa		11.35	□□□□□ -0.59
PPFIA1-223	ENST00000532793	RILPL2	Q969X0	211 aa		11.35	□□□□□ -0.59

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