RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ELNP15502 786 aa28.81■■■□□ 2.2
USP48-214ENST00000532737 PDIA3P30101 505 aaKnown RBP28.81■■■□□ 2.2
USP48-214ENST00000532737 CDC27P30260 824 aa28.81■■■□□ 2.2
USP48-214ENST00000532737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.81■■■□□ 2.2
USP48-214ENST00000532737 HOMER1Q86YM7 354 aa28.81■■■□□ 2.2
USP48-214ENST00000532737 PIBF1Q8WXW3 757 aa28.81■■■□□ 2.2
USP48-214ENST00000532737 ACAD9Q9H845 621 aa28.81■■■□□ 2.2
USP48-214ENST00000532737 RBM28Q9NW13 759 aaKnown RBP28.81■■■□□ 2.2
USP48-214ENST00000532737 POTEFA5A3E0 1075 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 ZBTB5O15062 677 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 XRCC5P13010 732 aaKnown RBP28.8■■■□□ 2.2
USP48-214ENST00000532737 NEK4P51957 841 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 USH1GQ495M9 461 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 FBXO11Q86XK2 927 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 NPLOC4Q8TAT6 608 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 SH3TC2Q8TF17 1288 aa28.8■■■□□ 2.2
USP48-214ENST00000532737 PGK2P07205 417 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 HOXC6P09630 235 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 GRK4P32298 578 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 METAP2P50579 478 aaKnown RBP eCLIP28.79■■■□□ 2.2
USP48-214ENST00000532737 AK2P54819 239 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 DPP9Q86TI2 863 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 CCDC82Q8N4S0 544 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 PXYLP1Q8TE99 480 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 CLEC4DQ8WXI8 215 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 ARMC5Q96C12 935 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 APBA2Q99767 749 aa28.79■■■□□ 2.2
USP48-214ENST00000532737 BRCA2P51587 3418 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 BAZ2BQ9UIF8 2168 aaKnown RBP28.78■■■□□ 2.2
USP48-214ENST00000532737 ADD1P35611 737 aaKnown RBP28.78■■■□□ 2.2
USP48-214ENST00000532737 CCL14Q16627 93 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 SLC9C1Q4G0N8 1177 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 ANKRD35Q8N283 1001 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 SLAIN1Q8ND83 568 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 DDX11Q96FC9 970 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 AMNQ9BXJ7 453 aa28.78■■■□□ 2.2
USP48-214ENST00000532737 A1CFQ9NQ94 594 aaKnown RBP28.78■■■□□ 2.2
USP48-214ENST00000532737 SMCHD1A6NHR9 2005 aa28.77■■■□□ 2.2
USP48-214ENST00000532737 PNMA6FA0A0J9YX94 578 aa28.77■■■□□ 2.2
USP48-214ENST00000532737 NFIBO00712 420 aa28.77■■■□□ 2.2
USP48-214ENST00000532737 FUT2Q10981 343 aa28.77■■■□□ 2.2
USP48-214ENST00000532737 PPP2R5BQ15173 497 aa28.77■■■□□ 2.2
USP48-214ENST00000532737 TRIB2Q92519 343 aa28.77■■■□□ 2.2
USP48-214ENST00000532737 RRP36Q96EU6 259 aaKnown RBP28.77■■■□□ 2.2
USP48-214ENST00000532737 ZNF274Q96GC6 653 aaPredicted RBP28.77■■■□□ 2.2
USP48-214ENST00000532737 NID2Q14112 1375 aa28.76■■■□□ 2.2
USP48-214ENST00000532737 DNAJC25-GNG10A0A024R161 153 aa28.76■■■□□ 2.19
USP48-214ENST00000532737 ZNF792Q3KQV3 632 aa28.76■■■□□ 2.19
USP48-214ENST00000532737 TBC1D32Q96NH3 1257 aa28.76■■■□□ 2.19
USP48-214ENST00000532737 FLRT1Q9NZU1 646 aa28.76■■■□□ 2.19
USP48-214ENST00000532737 ABCB11O95342 1321 aa28.75■■■□□ 2.19
USP48-214ENST00000532737 hCG_1642624A0A1W2PR95 340 aa28.75■■■□□ 2.19
USP48-214ENST00000532737 CCT2P78371 535 aaKnown RBP28.75■■■□□ 2.19
USP48-214ENST00000532737 NSMFQ6X4W1 530 aa28.75■■■□□ 2.19
USP48-214ENST00000532737 NCOA5Q9HCD5 579 aaKnown RBP28.75■■■□□ 2.19
USP48-214ENST00000532737 TPCN1Q9ULQ1 816 aa28.75■■■□□ 2.19
USP48-214ENST00000532737 PCDHA1Q9Y5I3 950 aa28.75■■■□□ 2.19
USP48-214ENST00000532737 CNTNAP5Q8WYK1 1306 aa28.74■■■□□ 2.19
USP48-214ENST00000532737 ZNF236Q9UL36 1845 aa28.74■■■□□ 2.19
USP48-214ENST00000532737 CCDC196A0A1B0GTZ2 297 aa28.74■■■□□ 2.19
USP48-214ENST00000532737 ANKRD1Q15327 319 aa28.74■■■□□ 2.19
USP48-214ENST00000532737 SLC5A4Q9NY91 659 aa28.74■■■□□ 2.19
USP48-214ENST00000532737 CYP39A1Q9NYL5 469 aa28.74■■■□□ 2.19
USP48-214ENST00000532737 TRIM32Q13049 653 aa28.73■■■□□ 2.19
USP48-214ENST00000532737 TRMT44Q8IYL2 757 aaKnown RBP28.73■■■□□ 2.19
USP48-214ENST00000532737 MAML3Q96JK9 1138 aa28.73■■■□□ 2.19
USP48-214ENST00000532737 BIN2Q9UBW5 565 aaPredicted RBP28.73■■■□□ 2.19
USP48-214ENST00000532737 MRPL11Q9Y3B7 192 aaKnown RBP28.73■■■□□ 2.19
USP48-214ENST00000532737 IGHA2P01877 340 aa28.72■■■□□ 2.19
USP48-214ENST00000532737 CNTN2Q02246 1040 aa28.72■■■□□ 2.19
USP48-214ENST00000532737 STK3Q13188 491 aa28.72■■■□□ 2.19
USP48-214ENST00000532737 BAATQ14032 418 aaPredicted RBP28.72■■■□□ 2.19
USP48-214ENST00000532737 NOL8Q76FK4 1167 aaKnown RBP28.72■■■□□ 2.19
USP48-214ENST00000532737 TBC1D5Q92609 795 aa28.72■■■□□ 2.19
USP48-214ENST00000532737 ZNF333Q96JL9 665 aa28.72■■■□□ 2.19
USP48-214ENST00000532737 SEC63Q9UGP8 760 aaKnown RBP28.72■■■□□ 2.19
USP48-214ENST00000532737 DIS3Q9Y2L1 958 aaKnown RBP28.72■■■□□ 2.19
USP48-214ENST00000532737 V9GY48 417 aaPredicted RBP28.72■■■□□ 2.19
USP48-214ENST00000532737 PFASO15067 1338 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 POTEB2H3BUK9 544 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 HMGCRP04035 888 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 INHAP05111 366 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 NTRK3Q16288 839 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 FAM133AQ8N9E0 248 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 FGD4Q96M96 766 aa28.71■■■□□ 2.19
USP48-214ENST00000532737 OPLAHO14841 1288 aa28.7■■■□□ 2.18
USP48-214ENST00000532737 TRAF1Q13077 416 aa28.7■■■□□ 2.18
USP48-214ENST00000532737 OLFML2BQ68BL8 750 aa28.7■■■□□ 2.18
USP48-214ENST00000532737 SLC30A10Q6XR72 485 aa28.7■■■□□ 2.18
USP48-214ENST00000532737 RNF207Q6ZRF8 634 aa28.7■■■□□ 2.18
USP48-214ENST00000532737 RGS22Q8NE09 1264 aa28.7■■■□□ 2.18
USP48-214ENST00000532737 PURBQ96QR8 312 aaKnown RBP28.7■■■□□ 2.18
USP48-214ENST00000532737 ZNFX1Q9P2E3 1918 aaKnown RBP28.69■■■□□ 2.18
USP48-214ENST00000532737 PTPDC1A2A3K4 754 aa28.69■■■□□ 2.18
USP48-214ENST00000532737 MYCP01106 439 aaPredicted RBP28.69■■■□□ 2.18
USP48-214ENST00000532737 SOWAHBA6NEL2 793 aa28.68■■■□□ 2.18
USP48-214ENST00000532737 PFKFB2O60825 505 aa28.68■■■□□ 2.18
USP48-214ENST00000532737 CALML3P27482 149 aa28.68■■■□□ 2.18
USP48-214ENST00000532737 CYP2C19P33261 490 aa28.68■■■□□ 2.18
USP48-214ENST00000532737 RPS6P62753 249 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms