RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 E7EWF7 191 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 RTP1P59025 263 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 NCOA7Q8NI08 942 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
PHRF1-204ENST00000532550 PRO3102Q9H379 93 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 CPVLQ9H3G5 476 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 SPC25Q9HBM1 224 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 ADD3Q9UEY8 706 aaKnown RBP20.14■□□□□ 0.81
PHRF1-204ENST00000532550 PRKAG2Q9UGJ0 569 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 ATP11BQ9Y2G3 1177 aa20.14■□□□□ 0.81
PHRF1-204ENST00000532550 WDR19Q8NEZ3 1342 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 NFIBO00712 420 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 IFIT3O14879 490 aaKnown RBP20.13■□□□□ 0.81
PHRF1-204ENST00000532550 DHX16O60231 1041 aaKnown RBP20.13■□□□□ 0.81
PHRF1-204ENST00000532550 ADAMTS4O75173 837 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 SEC23AQ15436 765 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 ADGRF4Q8IZF3 695 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 GDF15Q99988 308 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 TSEN34Q9BSV6 310 aaKnown RBP20.13■□□□□ 0.81
PHRF1-204ENST00000532550 VAT1LQ9HCJ6 419 aa20.13■□□□□ 0.81
PHRF1-204ENST00000532550 RBM8AQ9Y5S9 174 aaKnown RBP20.13■□□□□ 0.81
PHRF1-204ENST00000532550 SYNRGQ9UMZ2 1314 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 A0A1W2PPC1 479 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 CALML3P27482 149 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 BMP8BP34820 402 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 FXR1P51114 621 aaKnown RBP eCLIP20.12■□□□□ 0.81
PHRF1-204ENST00000532550 SART3Q15020 963 aaKnown RBP20.12■□□□□ 0.81
PHRF1-204ENST00000532550 USH1GQ495M9 461 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
PHRF1-204ENST00000532550 CLEC4DQ8WXI8 215 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 PURBQ96QR8 312 aaKnown RBP20.12■□□□□ 0.81
PHRF1-204ENST00000532550 KATNBL1Q9H079 304 aa20.12■□□□□ 0.81
PHRF1-204ENST00000532550 C6orf222P0C671 652 aaPredicted RBP20.11■□□□□ 0.81
PHRF1-204ENST00000532550 MAGEA10P43363 369 aaPredicted RBP20.11■□□□□ 0.81
PHRF1-204ENST00000532550 TNFAIP2Q03169 654 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 KCNA10Q16322 511 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 CDC37Q16543 378 aaPredicted RBP20.11■□□□□ 0.81
PHRF1-204ENST00000532550 BMP2KLQ5H9B9 411 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 PCSK9Q8NBP7 692 aaKnown RBP20.11■□□□□ 0.81
PHRF1-204ENST00000532550 KLHDC9Q8NEP7 349 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 ESYT1Q9BSJ8 1104 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 DNAH12Q6ZR08 3092 aa20.11■□□□□ 0.81
PHRF1-204ENST00000532550 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 ACLYP53396 1101 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 WTAPQ15007 396 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 C1orf53Q5VUE5 145 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 IQSEC1Q6DN90 963 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 EEPD1Q7L9B9 569 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 CHST3Q7LGC8 479 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 RGS22Q8NE09 1264 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 MPHOSPH6Q99547 160 aaKnown RBP20.1■□□□□ 0.81
PHRF1-204ENST00000532550 LBHD1Q9BQE6 289 aaPredicted RBP20.1■□□□□ 0.81
PHRF1-204ENST00000532550 TAF6LQ9Y6J9 622 aa20.1■□□□□ 0.81
PHRF1-204ENST00000532550 RANBP2P49792 3224 aaKnown RBP20.1■□□□□ 0.81
PHRF1-204ENST00000532550 ASTN1O14525 1302 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 LOC102724159A0A0B4J2E5 919 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 A0A1W2PQ45 241 aaPredicted RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 A0A1W2PQY0 241 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 KLRF2D3W0D1 207 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 ALDH5A1P51649 535 aaPredicted RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 GJA9P57773 515 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 RPS6P62753 249 aaKnown RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 SNX17Q15036 470 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 PWP2Q15269 919 aaKnown RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 TRIM60Q495X7 471 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 GNASQ5JWF2 1037 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 SKAP1Q86WV1 359 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 STAG2Q8N3U4 1231 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 UBE2OQ9C0C9 1292 aaKnown RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 LSG1Q9H089 658 aaKnown RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 JMJD4Q9H9V9 463 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 VTA1Q9NP79 307 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 STARD7Q9NQZ5 370 aa20.09■□□□□ 0.81
PHRF1-204ENST00000532550 DDX49Q9Y6V7 483 aaKnown RBP20.09■□□□□ 0.81
PHRF1-204ENST00000532550 ABCB11O95342 1321 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 B4DLN1 442 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 ADCY6O43306 1168 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 MRPL12P52815 198 aaKnown RBP20.08■□□□□ 0.81
PHRF1-204ENST00000532550 MDM2Q00987 491 aaPredicted RBP20.08■□□□□ 0.81
PHRF1-204ENST00000532550 QRICH1Q2TAL8 776 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 TMEM67Q5HYA8 995 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 SLC30A10Q6XR72 485 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 STOX1Q6ZVD7 989 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 FBXO11Q86XK2 927 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 MORC4Q8TE76 937 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 VTI1AQ96AJ9 217 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 MAF1Q9H063 256 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 AP5M1Q9H0R1 490 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.81
PHRF1-204ENST00000532550 PDGFCQ9NRA1 345 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.81
PHRF1-204ENST00000532550 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 PALM3A6NDB9 673 aaPredicted RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 MYADML2A6NDP7 307 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 CST5P28325 142 aaPredicted RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 TLE2Q04725 743 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms