RNA–Protein interactions for RNA: ENST00000532138.1

SCN4B-206, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4

Gene SCN4B, Length 850 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-206ENST00000532138 FMNL1O95466 1100 aaPredicted RBP23.21■■□□□ 1.31
SCN4B-206ENST00000532138 GNRH1P01148 92 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 ALAS1P13196 640 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 SLC4A3P48751 1232 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 WDR78Q5VTH9 848 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
SCN4B-206ENST00000532138 PLEKHH3Q7Z736 793 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 COA7Q96BR5 231 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 TRIM47Q96LD4 638 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 RNF146Q9NTX7 359 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 RBM27Q9P2N5 1060 aaKnown RBP23.21■■□□□ 1.31
SCN4B-206ENST00000532138 ABCB11O95342 1321 aa23.21■■□□□ 1.31
SCN4B-206ENST00000532138 RBBP6Q7Z6E9 1792 aaKnown RBP23.21■■□□□ 1.31
SCN4B-206ENST00000532138 CAP1Q01518 475 aa23.2■■□□□ 1.3
SCN4B-206ENST00000532138 PIBF1Q8WXW3 757 aa23.2■■□□□ 1.3
SCN4B-206ENST00000532138 TRERF1Q96PN7 1200 aa23.2■■□□□ 1.3
SCN4B-206ENST00000532138 RNF26Q9BY78 433 aaPredicted RBP23.2■■□□□ 1.3
SCN4B-206ENST00000532138 ACAD9Q9H845 621 aa23.2■■□□□ 1.3
SCN4B-206ENST00000532138 IVNS1ABPQ9Y6Y0 642 aa23.2■■□□□ 1.3
SCN4B-206ENST00000532138 STRNO43815 780 aa23.19■■□□□ 1.3
SCN4B-206ENST00000532138 PPP1R11O60927 126 aaPredicted RBP23.19■■□□□ 1.3
SCN4B-206ENST00000532138 CDKL5O76039 1030 aa23.19■■□□□ 1.3
SCN4B-206ENST00000532138 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
SCN4B-206ENST00000532138 CD2BP2O95400 341 aaKnown RBP23.19■■□□□ 1.3
SCN4B-206ENST00000532138 HOXD10P28358 340 aa23.19■■□□□ 1.3
SCN4B-206ENST00000532138 USH1GQ495M9 461 aa23.19■■□□□ 1.3
SCN4B-206ENST00000532138 ABRAQ8N0Z2 381 aa23.19■■□□□ 1.3
SCN4B-206ENST00000532138 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
SCN4B-206ENST00000532138 PRPF3O43395 683 aaKnown RBP23.18■■□□□ 1.3
SCN4B-206ENST00000532138 TAL1P17542 331 aaPredicted RBP23.18■■□□□ 1.3
SCN4B-206ENST00000532138 PTPREP23469 700 aa23.18■■□□□ 1.3
SCN4B-206ENST00000532138 AKAP17AQ02040 695 aaKnown RBP23.18■■□□□ 1.3
SCN4B-206ENST00000532138 SOCS4Q8WXH5 440 aa23.18■■□□□ 1.3
SCN4B-206ENST00000532138 HOMER2Q9NSB8 354 aa23.18■■□□□ 1.3
SCN4B-206ENST00000532138 MRPL11Q9Y3B7 192 aaKnown RBP23.18■■□□□ 1.3
SCN4B-206ENST00000532138 V9GY48 417 aaPredicted RBP23.18■■□□□ 1.3
SCN4B-206ENST00000532138 SLC15A5A6NIM6 579 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 FCER1AP12319 257 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 PRMT2P55345 433 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 ST3GAL1Q11201 340 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 GRB14Q14449 540 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 MUM1L1Q5H9M0 696 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 TRIM22Q8IYM9 498 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 PHKBQ93100 1093 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 MMP19Q99542 508 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 SLC26A6Q9BXS9 759 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 PCDHA1Q9Y5I3 950 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 PLXNA1Q9UIW2 1896 aa23.17■■□□□ 1.3
SCN4B-206ENST00000532138 hCG_1642624A0A1W2PR95 340 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 hCG_1984214I3L0E3 225 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 SSRP1Q08945 709 aaKnown RBP23.16■■□□□ 1.3
SCN4B-206ENST00000532138 MORN1Q5T089 497 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 OTOP1Q7RTM1 612 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 ZNF713Q8N859 430 aaPredicted RBP23.16■■□□□ 1.3
SCN4B-206ENST00000532138 CLEC4DQ8WXI8 215 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 NUDT12Q9BQG2 462 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 MAF1Q9H063 256 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 SRRDQ9UH36 339 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 TRIM17Q9Y577 477 aa23.16■■□□□ 1.3
SCN4B-206ENST00000532138 STK36Q9NRP7 1315 aa23.15■■□□□ 1.3
SCN4B-206ENST00000532138 CTDNEP1O95476 244 aa23.15■■□□□ 1.3
SCN4B-206ENST00000532138 KCTD2Q14681 263 aa23.15■■□□□ 1.3
SCN4B-206ENST00000532138 PFKFB3Q16875 520 aaPredicted RBP23.15■■□□□ 1.3
SCN4B-206ENST00000532138 FBXO46Q6PJ61 603 aaPredicted RBP23.15■■□□□ 1.3
SCN4B-206ENST00000532138 CCDC83Q8IWF9 413 aa23.15■■□□□ 1.3
SCN4B-206ENST00000532138 TMX3Q96JJ7 454 aa23.15■■□□□ 1.3
SCN4B-206ENST00000532138 GJD2Q9UKL4 321 aa23.15■■□□□ 1.3
SCN4B-206ENST00000532138 SCG2P13521 617 aa23.14■■□□□ 1.29
SCN4B-206ENST00000532138 RGS22Q8NE09 1264 aa23.14■■□□□ 1.29
SCN4B-206ENST00000532138 NSUN7Q8NE18 718 aaKnown RBP23.14■■□□□ 1.29
SCN4B-206ENST00000532138 SNX21Q969T3 373 aa23.14■■□□□ 1.29
SCN4B-206ENST00000532138 A1CFQ9NQ94 594 aaKnown RBP23.14■■□□□ 1.29
SCN4B-206ENST00000532138 PFASO15067 1338 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 NFIBO00712 420 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 DEXIO95424 95 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 ADORA2AP29274 412 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 RGS2P41220 211 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 PRKCZQ05513 592 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 MAP2K5Q13163 448 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 PKN1Q16512 942 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 WWC2Q6AWC2 1192 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 HEATR3Q7Z4Q2 680 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 MCF2L2Q86YR7 1114 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 ANKRD35Q8N283 1001 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 USP6NLQ92738 828 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 LLPHQ9BRT6 129 aaKnown RBP23.13■■□□□ 1.29
SCN4B-206ENST00000532138 GABRQQ9UN88 632 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 LCTP09848 1927 aa23.13■■□□□ 1.29
SCN4B-206ENST00000532138 FLT3LGP49771 235 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 IRF5Q13568 498 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 PPP1R18Q6NYC8 613 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 NSMFQ6X4W1 530 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 SAMD3Q8N6K7 520 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 GPKOWQ92917 476 aaPredicted RBP eCLIP23.12■■□□□ 1.29
SCN4B-206ENST00000532138 DDX11Q96FC9 970 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 BARHL2Q9NY43 387 aa23.12■■□□□ 1.29
SCN4B-206ENST00000532138 DNAJC25-GNG10A0A024R161 153 aa23.11■■□□□ 1.29
SCN4B-206ENST00000532138 PTPDC1A2A3K4 754 aa23.11■■□□□ 1.29
SCN4B-206ENST00000532138 PPFIA3O75145 1194 aa23.11■■□□□ 1.29
SCN4B-206ENST00000532138 HOXC6P09630 235 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms