RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	RNF146	Q9NTX7	359 aa		24.63	■■□□□ 1.53
PABPC4-225	ENST00000531243	SLC5A4	Q9NY91	659 aa		24.63	■■□□□ 1.53
PABPC4-225	ENST00000531243	RBBP6	Q7Z6E9	1792 aa	Known RBP	24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	ECM2	O94769	699 aa	Predicted RBP	24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	SSRP1	Q08945	709 aa	Known RBP	24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	ABRA	Q8N0Z2	381 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	PIBF1	Q8WXW3	757 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	GTF3C6	Q969F1	213 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	TRIM47	Q96LD4	638 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	MMP19	Q99542	508 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	NUDT12	Q9BQG2	462 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	HOMER2	Q9NSB8	354 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	PCDHA1	Q9Y5I3	950 aa		24.62	■■□□□ 1.53
PABPC4-225	ENST00000531243	ZSWIM8	A7E2V4	1837 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	SLC15A5	A6NIM6	579 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	PRPF3	O43395	683 aa	Known RBP	24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	MCF2L2	Q86YR7	1114 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	ANKRD35	Q8N283	1001 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	ARHGAP39	Q9C0H5	1083 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	RIPK3	Q9Y572	518 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	TRIM17	Q9Y577	477 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243		V9GY48	417 aa	Predicted RBP	24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	ZNF236	Q9UL36	1845 aa		24.61	■■□□□ 1.53
PABPC4-225	ENST00000531243	PTPRE	P23469	700 aa		24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	NTRK3	Q16288	839 aa		24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	SLC35G1	Q2M3R5	365 aa		24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	CTU1	Q7Z7A3	348 aa	Known RBP	24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	DDX11	Q96FC9	970 aa		24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	SLC26A6	Q9BXS9	759 aa		24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	PFAS	O15067	1338 aa		24.6	■■□□□ 1.53
PABPC4-225	ENST00000531243	FUT2	Q10981	343 aa		24.59	■■□□□ 1.53
PABPC4-225	ENST00000531243	PKN2	Q16513	984 aa	Known RBP	24.59	■■□□□ 1.53
PABPC4-225	ENST00000531243	SAMD3	Q8N6K7	520 aa		24.59	■■□□□ 1.53
PABPC4-225	ENST00000531243	SRRD	Q9UH36	339 aa		24.59	■■□□□ 1.53
PABPC4-225	ENST00000531243	PLXNA1	Q9UIW2	1896 aa		24.59	■■□□□ 1.53
PABPC4-225	ENST00000531243	DEXI	O95424	95 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	CTGF	P29279	349 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	RGS2	P41220	211 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	GRB14	Q14449	540 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	OTOP1	Q7RTM1	612 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	DPP9	Q86TI2	863 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	NECAB1	Q8N987	351 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	CCDC12	Q8WUD4	166 aa	Predicted RBP	24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	PHKB	Q93100	1093 aa		24.58	■■□□□ 1.53
PABPC4-225	ENST00000531243	LARGE1	O95461	756 aa		24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	PFKFB3	Q16875	520 aa	Predicted RBP	24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	HEATR3	Q7Z4Q2	680 aa		24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	RGS22	Q8NE09	1264 aa		24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	WASF1	Q92558	559 aa		24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	LLPH	Q9BRT6	129 aa	Known RBP	24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	MAP3K20	Q9NYL2	800 aa	Known RBP	24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	STK36	Q9NRP7	1315 aa		24.57	■■□□□ 1.52
PABPC4-225	ENST00000531243	SCG2	P13521	617 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	ADORA2A	P29274	412 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	MAP2K5	Q13163	448 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	MORN1	Q5T089	497 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	PPP1R18	Q6NYC8	613 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	NSMF	Q6X4W1	530 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	CCDC83	Q8IWF9	413 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	RAET1E	Q8TD07	263 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	PCNT	O95613	3336 aa		24.56	■■□□□ 1.52
PABPC4-225	ENST00000531243	hCG_1642624	A0A1W2PR95	340 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	PTPDC1	A2A3K4	754 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	PPP1R11	O60927	126 aa	Predicted RBP	24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	XBP1	P17861	261 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	FLT3LG	P49771	235 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	PRKCZ	Q05513	592 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	MUM1L1	Q5H9M0	696 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	RNF207	Q6ZRF8	634 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	TRMT44	Q8IYL2	757 aa	Known RBP	24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	TMX3	Q96JJ7	454 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	GLT8D2	Q9H1C3	349 aa		24.55	■■□□□ 1.52
PABPC4-225	ENST00000531243	NAPA	P54920	295 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	IRF5	Q13568	498 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	TEX2	Q8IWB9	1127 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	CCDC148	Q8NFR7	591 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	CUL5	Q93034	780 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	A1CF	Q9NQ94	594 aa	Known RBP	24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	BARHL2	Q9NY43	387 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	GJD2	Q9UKL4	321 aa		24.54	■■□□□ 1.52
PABPC4-225	ENST00000531243	POTEB2	H3BUK9	544 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	NFIB	O00712	420 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	XRCC5	P13010	732 aa	Known RBP	24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	HMGN5	P82970	282 aa	Known RBP	24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	HSCB	Q8IWL3	235 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	FAM177A1	Q8N128	213 aa	Predicted RBP	24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	CLEC4D	Q8WXI8	215 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	SNX21	Q969T3	373 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	MPHOSPH6	Q99547	160 aa	Known RBP	24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	APBA2	Q99767	749 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	DIS3	Q9Y2L1	958 aa	Known RBP	24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	PTPN22	Q9Y2R2	807 aa		24.53	■■□□□ 1.52
PABPC4-225	ENST00000531243	CD2BP2	O95400	341 aa	Known RBP	24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	CFB	P00751	764 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	HOXC6	P09630	235 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	CYP2B6	P20813	491 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	WWC2	Q6AWC2	1192 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	NSUN7	Q8NE18	718 aa	Known RBP	24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	24.52	■■□□□ 1.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms