RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 CDC37Q16543 378 aaPredicted RBP18.94■□□□□ 0.62
RELA-216ENST00000531238 QRICH1Q2TAL8 776 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 ZNF467Q7Z7K2 595 aaPredicted RBP18.94■□□□□ 0.62
RELA-216ENST00000531238 PAWRQ96IZ0 340 aaKnown RBP18.94■□□□□ 0.62
RELA-216ENST00000531238 TMEM87BQ96K49 555 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 TCEANC2Q96MN5 208 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 DDX20Q9UHI6 824 aaKnown RBP18.94■□□□□ 0.62
RELA-216ENST00000531238 SNX14Q9Y5W7 946 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 PPP1R11O60927 126 aaPredicted RBP18.93■□□□□ 0.62
RELA-216ENST00000531238 LIFRP42702 1097 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 USH1GQ495M9 461 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 NSMFQ6X4W1 530 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 CATIPQ7Z7H3 387 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 ZNF654Q8IZM8 581 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 RIOX1Q9H6W3 641 aa18.93■□□□□ 0.62
RELA-216ENST00000531238 SEPT4O43236 478 aa18.92■□□□□ 0.62
RELA-216ENST00000531238 FARP2O94887 1054 aaPredicted RBP18.92■□□□□ 0.62
RELA-216ENST00000531238 DHX32Q7L7V1 743 aaKnown RBP18.92■□□□□ 0.62
RELA-216ENST00000531238 RAB11FIP4Q86YS3 637 aa18.92■□□□□ 0.62
RELA-216ENST00000531238 MSL3Q8N5Y2 521 aaKnown RBP18.92■□□□□ 0.62
RELA-216ENST00000531238 NUP133Q8WUM0 1156 aa18.92■□□□□ 0.62
RELA-216ENST00000531238 KATNBL1Q9H079 304 aa18.92■□□□□ 0.62
RELA-216ENST00000531238 PLXNA1Q9UIW2 1896 aa18.92■□□□□ 0.62
RELA-216ENST00000531238 CAPN2P17655 700 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 RXRAP19793 462 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 SLC30A10Q6XR72 485 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 CCDC144CPQ8IYA2 1237 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 TMTC2Q8N394 836 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 PIGSQ96S52 555 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 MAP3K14Q99558 947 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.91■□□□□ 0.62
RELA-216ENST00000531238 BRPF3Q9ULD4 1205 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 SYNGAP1Q96PV0 1343 aa18.91■□□□□ 0.62
RELA-216ENST00000531238 DHX16O60231 1041 aaKnown RBP18.9■□□□□ 0.62
RELA-216ENST00000531238 ACVR2BQ13705 512 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 ARMCX2Q7L311 632 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 SGMS1Q86VZ5 419 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 FBXO11Q86XK2 927 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 ANKLE1Q8NAG6 615 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 NRBP1Q9UHY1 535 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 PFASO15067 1338 aa18.9■□□□□ 0.62
RELA-216ENST00000531238 CCDC69A6NI79 296 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 OPLAHO14841 1288 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 ZBTB5O15062 677 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 ADCY6O43306 1168 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 DDAH1O94760 285 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 REC8O95072 547 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 PLEKHA8P1O95397 391 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
RELA-216ENST00000531238 KRT32Q14532 448 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 NFXL1Q6ZNB6 911 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 RNF207Q6ZRF8 634 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
RELA-216ENST00000531238 SRBD1Q8N5C6 995 aaKnown RBP18.89■□□□□ 0.61
RELA-216ENST00000531238 RGS22Q8NE09 1264 aa18.89■□□□□ 0.61
RELA-216ENST00000531238 LENG1Q96BZ8 264 aaPredicted RBP18.89■□□□□ 0.61
RELA-216ENST00000531238 PDE4DIPQ5VU43 2346 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 PTPDC1A2A3K4 754 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 MSCO60682 206 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 COL6A1P12109 1028 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 CALML3P27482 149 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 NECAB2Q7Z6G3 386 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 MORC4Q8TE76 937 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 JAKMIP1Q96N16 626 aaKnown RBP18.88■□□□□ 0.61
RELA-216ENST00000531238 COL20A1Q9P218 1284 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 PNMA2Q9UL42 364 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 ABCB11O95342 1321 aa18.88■□□□□ 0.61
RELA-216ENST00000531238 BAZ2BQ9UIF8 2168 aaKnown RBP18.88■□□□□ 0.61
RELA-216ENST00000531238 IRX5P78411 483 aaPredicted RBP18.87■□□□□ 0.61
RELA-216ENST00000531238 GJC2Q5T442 439 aaPredicted RBP18.87■□□□□ 0.61
RELA-216ENST00000531238 HOMER1Q86YM7 354 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 FANCBQ8NB91 859 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 PIBF1Q8WXW3 757 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 AMNQ9BXJ7 453 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 ABHD16BQ9H3Z7 469 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 PDGFCQ9NRA1 345 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 ZHX1Q9UKY1 873 aaPredicted RBP18.87■□□□□ 0.61
RELA-216ENST00000531238 CNPY2Q9Y2B0 182 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 SLC12A7Q9Y666 1083 aa18.87■□□□□ 0.61
RELA-216ENST00000531238 LCTP09848 1927 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 PNMA6FA0A0J9YX94 578 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 EPB41L2O43491 1005 aaKnown RBP18.86■□□□□ 0.61
RELA-216ENST00000531238 PTGS1P23219 599 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 ALDH5A1P51649 535 aaPredicted RBP18.86■□□□□ 0.61
RELA-216ENST00000531238 CCDC144BQ3MJ40 725 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 TAPT1Q6NXT6 567 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 SYTL5Q8TDW5 730 aaPredicted RBP18.86■□□□□ 0.61
RELA-216ENST00000531238 TAAR1Q96RJ0 339 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 C11orf49Q9H6J7 331 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 MRPL11Q9Y3B7 192 aaKnown RBP18.86■□□□□ 0.61
RELA-216ENST00000531238 PCDHA1Q9Y5I3 950 aa18.86■□□□□ 0.61
RELA-216ENST00000531238 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.85■□□□□ 0.61
RELA-216ENST00000531238 ASB14A6NK59 587 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 SEC24BO95487 1268 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 PGK1P00558 417 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 HMGB1P09429 215 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms